Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc121248g00001 | ATGGCAACAAATGGTTCCAATGATGATCTCAAATATGACCAAAATCAAGTCTCAAACCTCCACAACAATTCCAATGTGATAGAATTTGTGAAGTTATCCAATGATGGTTTAATCCATGGGTCGAAAATGGAAGAACTTGATCTTTTCCACATAGAACACAAGACAACACCACCACCACGCCCAAATAATTTAGAAGTAAAGCCCTTCTCATGCAATTTTTGTAAGAAGGGGTTCACTTCTTCACAAGCATTAGGAGGGCATCAAAATGCACACAAACAAGAGCGCGCGATAGCGAAACGTCGCCAAGAGACTGATGCTGGCCATGGCGGTGGTATTTTTGGTTACCCTTATTCCTTTTCCTACTACCACCCTTTCCCTAGCTTTTCCACACACCCTTTGTCTCATAATAATAGGGCACTTGGGGTGAGGTTGGAATCCAAGATTCATAAGCCAAATGATTGGAATAGTGGAATCATGATGATGAGGCATGCCCATGAAATCAACAAGCAAGAAGAAGACCCCTCTAGCTCTATGCTTGATTTGTCACTTAAGCTTTAA | 558 | 0.4158 | MATNGSNDDLKYDQNQVSNLHNNSNVIEFVKLSNDGLIHGSKMEELDLFHIEHKTTPPPRPNNLEVKPFSCNFCKKGFTSSQALGGHQNAHKQERAIAKRRQETDAGHGGGIFGYPYSFSYYHPFPSFSTHPLSHNNRALGVRLESKIHKPNDWNSGIMMMRHAHEINKQEEDPSSSMLDLSLKL | 185 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc121248g00001 | 185 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 71 | 91 | IPR013087 | - | |
Stsc121248g00001 | 185 | Gene3D | Classic Zinc Finger | 46 | 108 | - | - | |
Stsc121248g00001 | 185 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 7 | 156 | IPR044246 | GO:0009788 | |
Stsc121248g00001 | 185 | SUPERFAMILY | beta-beta-alpha zinc fingers | 67 | 96 | IPR036236 | - | |
Stsc121248g00001 | 185 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 69 | 96 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc121248g00001 | Stsc-Chr121248 | 1143 | 1700 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc121248g00001 | 65 | 155 | C2H2 Transcription Factor Family | AT5G25160 | 49.451 | 1.46e-19 | 81.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Stsc121248g00001 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc121248g00001 | - | - | ahf:112786570 | 210.305 |