Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121238g00008 ATGCTCCTTCACTATTATTGTTTATTGTTCCACCATATGGCTCTTCTACTTGTACCTCGTTGGTTCCTGTCTCTTCTTCTTCTCCTTCACTTTCTCTTGTCTTCCTCAGGATCAAATGTTGTCACCGTTAACGTTGCTGCTGCCAAGGGCCTTATTCACACCGGCTACCTTTATCTCGATGTCAGAACTGTGCAAGAGTTCAGAAAAGGCCATGTAGATGCTGCTAACATCATTAACATTCCATACATGCTTGACACACCCAACGGTAGGCTGAAGAATCCAGACTTTTTAAAAGAGGTTTCATCTGTTTGCAACAAACAAGATCATCTCATTGTGGGTTGCCAAAGTGGAGTGAGATCTCTGTATGCAACTACTGATCTTGTTGCTGATGGCTATAAGAATGTGAAGGACATGGGAGGGGGTTATATGGAGTGGGTCAAAAGCAAGTTTCCAGTGAAATCATCATTACAGAAAGAGGAGGAGCTCTAA 489 0.4274 MLLHYYCLLFHHMALLLVPRWFLSLLLLLHFLLSSSGSNVVTVNVAAAKGLIHTGYLYLDVRTVQEFRKGHVDAANIINIPYMLDTPNGRLKNPDFLKEVSSVCNKQDHLIVGCQSGVRSLYATTDLVADGYKNVKDMGGGYMEWVKSKFPVKSSLQKEEEL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121238g00008 162 PANTHER THIOSULFATE SULFURTRANSFERASE 18 34 161 IPR044684 GO:0003824
Stsc121238g00008 162 Gene3D - 32 154 IPR036873 -
Stsc121238g00008 162 Pfam Rhodanese-like domain 57 147 IPR001763 -
Stsc121238g00008 162 CDD RHOD 55 146 - -
Stsc121238g00008 162 SMART rhod_4 43 151 IPR001763 -
Stsc121238g00008 162 ProSiteProfiles Rhodanese domain profile. 52 154 IPR001763 -
Stsc121238g00008 162 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 39 152 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121238g00008 Stsc-Chr121238 37308 38374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121238g00008 34 161 Sulfurtransferasese or Rhodanese AT5G66170 56.250 3.85e-51 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121238g00008 - K15692 aip:107642568 238.424