Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121238g00007 ATGTTGTCATTTGGAGGAAAATGGTTAGGACTAGTGACAGCAATATGGGTTCAAGCAGTATGTGGAAACAACTACACTTTTGCCAACTACTCCCATGTTTTGAAGTCCTTAATGTCCCTAACACAGATGCAGCTCAACAATCTCTCTGTTGCTAAGGATTTTGGCAAGGCTTTTGGTCTTCTTTCTGGCCTTGCCTCTCATCACTTCTCCACTTCACTTCTACTCATCATTGGAGCCACCATGGGATTCATAGGCTATGGTCTTCAATTCCTTGTTGTCACCCAAACTATTACTCCACTCCCTTATTGGCTTATGTGTATATTCTTGTGTATGGGAGGAAACAGCACCACATGGATGAACACTGCAGTTCTTGTGACTTGTATGAGGAACTTTCCAAACAATAGAGGCCCAATTTCTGGAATTCTGAAAGGTTATGTGGGACTTAGCACTGCAATCTTCACTGACATTTGTTCTGCTTTGTTCTCCTCAGATCCTTCCATGTTTCTGCTCATGCTTACCATTTTTCCTGCCATTATTTGCTGCATTGCTGCTGTTTTCCTCCGCGAAACGCCGCCGGCTTCCACTTGTGCTCAAGAGAACAAAGAAGCTCAATTCCTCAACACATTCAACTTGATTGCTGTTACAGTAGCTGTTTACCTTTTAGCATTTGATGTTAGTGGAATTCATGGCCATGTTCTTTCCTTGATTTTCACAGCAGGGCTTCTTATCCTTTTGCTCATGCCTCTTCTTGTTCCTTTATATCTCATCATCTTCAATGATAATCCAAGTCCTGGTCCAGACCAAGAACAACAGATTCATGAAGCTTTGCTTGATGGGGACAAGAAGGTAGAGGAAGTTGAAACAACAAAAGGAAAGGCTGTTATAGGGGAGGAGCATAGCATAGGTGAAATGATGAGAAGCATTGAGTTTTGGATCATGTTTATGTCTTTTCTTTGTGGAGTGGGAACAGGAATGTGTGTGATGAACAACATGGGGCAAATGGGAGAAGCACTTGGTTACTCTGATGTCTCAATCTTCATCTCCTTCACTAGCATATGGGGTTTCTTTGGCCGCATTGTTTCTGGCTCACTCTCAGAACACTACATCAGAAAATCAGGGACGCCAAGGGTAGTTTGGAATGCAGGTGCACAAATCCTTATGAGTATAGGTTACATTGCATTGGCTATGGCAGTGCCAGGGTCACTTTACATAGGTTCAATGGTAGTGGGAATATGCTATGGAGTGTACTTTACAATAACACCAGCAGCAGCTTCAGAGTTATTTGGGCTAAAATACTATGGTATAGTATACAACATTCTGATTCTTAACCTTCCAATTGGGTCATTCATCTTCTCTGGCCTAATTGCTGGGTATCTGTATGATGTTGAAGCCACAACAAGTGTGGGTGGTGAGGGAAACAGCTGCATTGGTGCACATTGTTATAGGCTTGTTTATGTGATTATGGCTTTTGCTTCTCTGTTGGGGTGTGTATTGGACCTGCTGCTTGCTGTTAGAACAAGAAAGGTTTATTACATGATCTACCAACACAGAACAACACTTTCCAATTCAATTAAATAG 1578 0.4208 MLSFGGKWLGLVTAIWVQAVCGNNYTFANYSHVLKSLMSLTQMQLNNLSVAKDFGKAFGLLSGLASHHFSTSLLLIIGATMGFIGYGLQFLVVTQTITPLPYWLMCIFLCMGGNSTTWMNTAVLVTCMRNFPNNRGPISGILKGYVGLSTAIFTDICSALFSSDPSMFLLMLTIFPAIICCIAAVFLRETPPASTCAQENKEAQFLNTFNLIAVTVAVYLLAFDVSGIHGHVLSLIFTAGLLILLLMPLLVPLYLIIFNDNPSPGPDQEQQIHEALLDGDKKVEEVETTKGKAVIGEEHSIGEMMRSIEFWIMFMSFLCGVGTGMCVMNNMGQMGEALGYSDVSIFISFTSIWGFFGRIVSGSLSEHYIRKSGTPRVVWNAGAQILMSIGYIALAMAVPGSLYIGSMVVGICYGVYFTITPAAASELFGLKYYGIVYNILILNLPIGSFIFSGLIAGYLYDVEATTSVGGEGNSCIGAHCYRLVYVIMAFASLLGCVLDLLLAVRTRKVYYMIYQHRTTLSNSIK 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121238g00007 525 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 511 - -
Stsc121238g00007 525 SUPERFAMILY MFS general substrate transporter 41 509 IPR036259 -
Stsc121238g00007 525 CDD MFS_Mch1p_like 6 492 - -
Stsc121238g00007 525 Pfam Nodulin-like 7 253 IPR010658 -
Stsc121238g00007 525 Gene3D MFS general substrate transporter like domains 7 200 IPR036259 -
Stsc121238g00007 525 Gene3D MFS general substrate transporter like domains 302 509 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121238g00007 Stsc-Chr121238 34544 36562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121238g00007 7 519 Nodulin-like Gene Family AT4G34950 58.059 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121238g00007 - - tcc:18610755 686.026