Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121237g00003 ATGGCCTTTTCGCAAACCCTAGAAAATGCTTCTCCCTCTCTGGTCTTCGAAGTCCACAGAAAGCAACCAGAGCTGGTAGCTCCTTCTAAGCTCACACCTCATGAAACCAAGCTTCTATCCGACATCGATTCGCAAGCCGGCCTTCGCGCCCAAGTTCCCATCATACAGTTCTACCACAGTGATCCTTCAATGGAAGGAAAAGACCCAGTTGAAATCATTAGGAATGCAATTGCAGAAGCACTTGTGTTCTATTACCCACTTGCTGGTAGGGTTAGGGAAGGGGCTGATGGAAAACTCATGGTGGATTGTAATGAAGAAGGAGTGATGTTCATTGAAGCTGATGCTGATGTTACACTTGATCAGTTTGGGGATGCTCTTAAACCTCCATTTCCATGCTTTGAAGAGCTCCTTTATGATGTTCCCGGTTCAGAAGGAGTTATTGACACTCCCATTCTTCTTATTCAGGTGACTCGTCTGAAATGCGGCGGTTTCATCTTCGGCATCCGCTTCAACCACGCCATGATCGACGGCGTCGGCGTGGTCACGTTCATGTACACGCTCTCCGCATTGAGCCATGGCGCACAAGACCCTCCCTTCACCCCATTTTGGAGCAGGGAGCTCCTATGCGCACGTGACCCCCCTCGCGTCACGTGCACCCACCCGGAGTACGACCAACTCACAGAATCAAACGATGTAACCAACCCTTCCACCATTAATCTCCAGCAACACTCCTTCTTCTTCGGAGATTCCGAGGTATCAACCCTCCGATCCCTCCTCCCGGAAAGCCTCTCCGACGCAACCACCTACCATATCCTAACCGCATTCTTATGGCAATGCCGAACCAAAGCGTTGGGTTTTAATCCAAACGAAGACGTTAGAATGATGTGCATTACCGACGGGCGCGCCAAGTTTAATCCTCCCATTCCAATGAGTTACTACGGTAACTGCTTGGCGCTCCCGGCAGCTGTTACAACTGCCGGGAAGCTGTGCGAGGGCACTCTTGGATACGCCATTGGGCTTATCCAAGAGGCAATCGCAAAGGTTGACGAAGAATATATGCATTCTGTGGCTGATTTTATGGTTACAAAGGGGAGGCCTTTGTTTACTACGGTAAGGTCTTGCATTGTGTTGGATACTACTTATGCTGGGTTTAGAGGTGTGGATTTTGGGTGGGGTAAGGCTTTGTATGGAGGGTTAGCAAAACCTGGTGCTGGTGCATTCCCTGCGGTGAATTTTCACGTTCCTAGCCAGAATGAAAAGGGAGAAGAAGGTATATTGGTTCTTACTTGTTTGCCTGATCAAGCTTTGAAGGCTTTTGCCAAAGTGATGGATGAGGTGCTTGAGAGTAACAAAACAAAGTAA 1362 0.489 MAFSQTLENASPSLVFEVHRKQPELVAPSKLTPHETKLLSDIDSQAGLRAQVPIIQFYHSDPSMEGKDPVEIIRNAIAEALVFYYPLAGRVREGADGKLMVDCNEEGVMFIEADADVTLDQFGDALKPPFPCFEELLYDVPGSEGVIDTPILLIQVTRLKCGGFIFGIRFNHAMIDGVGVVTFMYTLSALSHGAQDPPFTPFWSRELLCARDPPRVTCTHPEYDQLTESNDVTNPSTINLQQHSFFFGDSEVSTLRSLLPESLSDATTYHILTAFLWQCRTKALGFNPNEDVRMMCITDGRAKFNPPIPMSYYGNCLALPAAVTTAGKLCEGTLGYAIGLIQEAIAKVDEEYMHSVADFMVTKGRPLFTTVRSCIVLDTTYAGFRGVDFGWGKALYGGLAKPGAGAFPAVNFHVPSQNEKGEEGILVLTCLPDQALKAFAKVMDEVLESNKTK 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121237g00003 453 Gene3D - 14 222 IPR023213 -
Stsc121237g00003 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 24 439 - -
Stsc121237g00003 453 Pfam Transferase family 18 444 - -
Stsc121237g00003 453 Gene3D - 223 445 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121237g00003 Stsc-Chr121237 29742 34698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121237g00003 17 446 Monolignol Biosynthesis Gene Families AT5G48930 28.217 2.75e-54 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121237g00003 K19861 - gmx:100820325 622.854