Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121233g00001 ATGGGAAAGGATTATTGGAATTGGTCTAGTAGATCTTCCAAGAGAAGCAGTAATAATGCTCCAACAACAACACCACCTTCTGGTTGCATGTGTGCCTTCTTTCACTTGTTTCATGCCCATCCATTTCATCACTTCCCCTCCACCACCACCCTTAATCAGCAACAAAAGTCATCACCCCAAGATAATAATAACAATGTTCCCCTTCCACAAGCAGCACCTAGGAATAGCTTGGAAGAAGAATCACATACTACTACTTCTTCTCTCATCAAACAAGAACAACATTTCAAAATTCCAAGGAAGATACAAGTGATGAAAACAAGTAGTAGCAGTGAAGTAGTGGGTGATATGTCTCCAGCAAAGACACCAACATTGGTAGCAAGATTGATGGGTCTTGATCTTCTTCCACCTCCTTCTTCACCCTCTTGTTCATCATCTTCATGCCTTTCCACACCAAATCTTCACCACCACCACCAAAACATTCTCTTGTCCAAACACAGGAACAGCACTGATTGTGTTATTGTTGGTTCATCACCAAGAAGAACAGCTTCAGATCTTGACTACTATCACCACAGACTCTCCCTCCAAATCAACACCAAGGAGCAAGACTTGGAGGAGATGCGGTTCTCAGCATCAAAAAGGAACCATTTTGATTACAACAACAACAACAATGTCTCTAATGGCAGAACAACAACAAGAACAAGTTCTTCTTCTTCTTCATCATCACCAAGCCATATGGCAAGGCAAATTGTGAAGCAAGTTAAGAAGAATGTGATGATGAGCAATAATAATAATAGAAAAGTTGGACAAGACATCACTAACACCCTCAAACCAAGAGAACAACTTGTTACCCAAATCAAACTTAAAAAGAAACTTTCTTCCAACCCATCATCATCACTTGATCATCCTGATTCAAACTCATCGTCATCATCATCATCTTTTTCTCCAAGGTTAAGACTCATAGAAACCAACAAAAACACCAACCACAACCCAACTCCTCCACCACCACAACCAGTGGAAGAGCTTCCAAGAGTTTTGATAAGGCCAAAGGAAGAAGAAGGGTCGTTGAAGCAGAACCAGAAATCATCAGTGACAAAATGTAATAATAAGAAGGTGAATCATGAAAAGTTCAACTCAGCATCATCATCAAAGCTGAAAAAGCAAGAGGAGCCATTCATAGTTCATGCCACAAGGACCCATAACAAGAAGACTCATCATCCATTGTCCAACAATCTTCTCAATAACATCAACACTGTCGGCCCCAACCTTTTCCCTATCAAGACTGAAGCTTCTCTTCCACCAACCAAAATTAATCACAATAAAAAGCAGTCATCAGGGGTATGTGACAAAAGTAGCCCCCAACAGTCATCTAGTCCTTGGAGCCATCATCACAGTCACAGGTACAAACAAAGCACACTCGCCACCCGAGAATTCAGCACAAACGACATCGTTCAAGCCAAAACCATTAACCACCATTCATATTCATCATCCACCACCGGAGAAGAATTTGCAGCTGAATCTGAAAAGCATCATCACGGACCAGAATTTCAGTATATCACAGGAATCCTAAGCCGTACTCTTAACAAGGAAGAACAACAACTTGCCACAACAACAACAACAGGTCAACGCTTCTTTCATGACCTCGAAGAACACCCAATTTTGAATTCCCGTGTTTCCACTCCCCAGAGCGTTAAAGATTGCATCTTTTCGATGACACAAAAACTGGGTCTGCGCTGGAATTGGAGGCTGATGTTTGACTTGGTGGATGAGGTGTTAATGGAGGTTCTTAGGCCTACTACAAAAAGCGACCAAAAGAGCAGGCTTTGGTTTTTGCATGGGCGTTGTTGTTGTTACCAAGGAACAACGGCTGAAGATTTAATGGAGAGAGTGTGGAAGAGGATAGGGAAGTTCCCATGCATGAGGTGTGAGTTTTTGGAGGACATTGATGGGTTGATAGAGTCAGAGGATATGGAGAAGGTGAAGGTTGATGTTGAAGATGGTTTGGAGGAAGAAGGAGAGAAGCTAGTGGCAGAGATTGAAGGGAACATATGGAACACATTAGTTCATGAATCCCTTATGGTTATGATCACTAGCTAG 2094 0.4193 MGKDYWNWSSRSSKRSSNNAPTTTPPSGCMCAFFHLFHAHPFHHFPSTTTLNQQQKSSPQDNNNNVPLPQAAPRNSLEEESHTTTSSLIKQEQHFKIPRKIQVMKTSSSSEVVGDMSPAKTPTLVARLMGLDLLPPPSSPSCSSSSCLSTPNLHHHHQNILLSKHRNSTDCVIVGSSPRRTASDLDYYHHRLSLQINTKEQDLEEMRFSASKRNHFDYNNNNNVSNGRTTTRTSSSSSSSSPSHMARQIVKQVKKNVMMSNNNNRKVGQDITNTLKPREQLVTQIKLKKKLSSNPSSSLDHPDSNSSSSSSSFSPRLRLIETNKNTNHNPTPPPPQPVEELPRVLIRPKEEEGSLKQNQKSSVTKCNNKKVNHEKFNSASSSKLKKQEEPFIVHATRTHNKKTHHPLSNNLLNNINTVGPNLFPIKTEASLPPTKINHNKKQSSGVCDKSSPQQSSSPWSHHHSHRYKQSTLATREFSTNDIVQAKTINHHSYSSSTTGEEFAAESEKHHHGPEFQYITGILSRTLNKEEQQLATTTTTGQRFFHDLEEHPILNSRVSTPQSVKDCIFSMTQKLGLRWNWRLMFDLVDEVLMEVLRPTTKSDQKSRLWFLHGRCCCYQGTTAEDLMERVWKRIGKFPCMRCEFLEDIDGLIESEDMEKVKVDVEDGLEEEGEKLVAEIEGNIWNTLVHESLMVMITS 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121233g00001 697 MobiDBLite consensus disorder prediction 350 388 - -
Stsc121233g00001 697 MobiDBLite consensus disorder prediction 432 460 - -
Stsc121233g00001 697 Pfam Domain of unknown function (DUF4378) 514 689 IPR025486 -
Stsc121233g00001 697 MobiDBLite consensus disorder prediction 46 93 - -
Stsc121233g00001 697 Pfam DUF761-associated sequence motif 119 136 IPR032795 -
Stsc121233g00001 697 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 695 - -
Stsc121233g00001 697 MobiDBLite consensus disorder prediction 46 92 - -
Stsc121233g00001 697 MobiDBLite consensus disorder prediction 429 473 - -
Stsc121233g00001 697 MobiDBLite consensus disorder prediction 214 247 - -
Stsc121233g00001 697 MobiDBLite consensus disorder prediction 1 24 - -
Stsc121233g00001 697 MobiDBLite consensus disorder prediction 288 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121233g00001 Stsc-Chr121233 6484 9545 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121233g00001 95 690 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 28.271 2.95e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121233g00001 - - aip:107644757 794.653