Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121227g00004 ATGAGATGGAATATTACAGGCGGAAAATTTCGGCGGAGAAGTCACAGCGTCATCGTCCTTTCACTGACGTCGCCGTCGTCGCGCCACAGCACTGCCGTGGGTGCTGTTCGAAGCCACCATCATCTTCGGAGCTCTCCTCCATCACTGGAGAGTTTACCTTCCGCCCAATCAACTCCCACCACCGCCCTCCATACTCATCATCACAGCCCTCCTATTCCTCCTCCTCAGACCAAAACTAACTCCAATTCACTTGCCAAGTTGCTTCTCCCTACCCCTCGTCGTCTCAAGATTGATCCTTCCAACAAGCTCTTCTTCCCTTGTTTATATAGGAATGGAAAAAGTTGCAGATTGAGGTGGATTAACTATCTAAGATCTAAGACCAGGATTAAAGAAGGGTCTGTTCAGCAAACAAGAGGAGGAGACAATCCTCTCCCTTCACCAGATGCTAGGCAACAAGGAAAATGCAGAGAAAATAAAAGAGAGTTAAAACTTAGCATCAGCACTACTGTTTTGTTTCTTGATGTAATCGATATATCTGGTGGCCATACCCTCAGAAATTTATACACCGGTGTCGTAGGATTGCAGGGAGCACAGAAGAATCTGCCACAGTTATGTACTAATCATCTTGATCCTACATCGTGCTTCTTCCCGCAGAACTTGATTGCAAGTGTTAGCACGCCGCTATTCATTCTTAATGCTGCTTATGATTCATGGCAAGTAAATCATGTGATATGTACAAAGAGATAG 747 0.4552 MRWNITGGKFRRRSHSVIVLSLTSPSSRHSTAVGAVRSHHHLRSSPPSLESLPSAQSTPTTALHTHHHSPPIPPPQTKTNSNSLAKLLLPTPRRLKIDPSNKLFFPCLYRNGKSCRLRWINYLRSKTRIKEGSVQQTRGGDNPLPSPDARQQGKCRENKRELKLSISTTVLFLDVIDISGGHTLRNLYTGVVGLQGAQKNLPQLCTNHLDPTSCFFPQNLIASVSTPLFILNAAYDSWQVNHVICTKR 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121227g00004 248 MobiDBLite consensus disorder prediction 29 82 - -
Stsc121227g00004 248 MobiDBLite consensus disorder prediction 131 157 - -
Stsc121227g00004 248 PANTHER NOTUM-RELATED 169 245 IPR004963 GO:0016787
Stsc121227g00004 248 MobiDBLite consensus disorder prediction 45 65 - -
Stsc121227g00004 248 Pfam Pectinacetylesterase 170 245 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121227g00004 Stsc-Chr121227 27797 30686 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121227g00004 166 244 Carbohydrate Esterase AT5G26670 68.354 2.58e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121227g00004 K19882 - gmx:100788448 141.354