Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121224g00005 ATGGAAGGAGGAGCTGCTCCACCTGCTGACGCTGTCATGTCCGACGCGGCGCCTCCGCCGCAGGACCATCAGCACCAGCACCAGCAGCCGGCACCGCCCACCACGGGTGTCGAGAATATTCCGGCCACGCTCAGCCACGGCGGAAGGTTCATCCAATACAACATATTTGGGAACATTTTCGAAGTCACCGCCAAATACAAACCCCCCATCATGCCCATCGGTAAAGGCGCTTATGGCATCGTTTGTTCCGCTCTGAATTCTGATACGAATGAGCATGTTGCCATTAAGAAGATTGCCAATGCATTTGACAACAAGATTGACGCCAAGAGGACCCTCCGTGAAATCAAGCTGCTTCGTCACATGGATCATGAAAACGTGGTTGCAATAAGGGACATAGTGCCACCACCTCAGAGGGAGGCATTCAATGATTACTTTCTGTATCAAATCCTCCGTGGTTTGAAGTACATACATTCTGCAAATGTTTTGCACAGGGACTTGAAACCTAGCAACCTTCTCCTGAATGCAAACTGTGACTTAAAAATTTGTGATTTTGGACTGGCCCGAGTCACCTCAGAGACTGATTTCATGACTGAATATGTTGTTACAAGATGGTACCGTGCACCAGAGCTTCTGTTAAACTCTTCTGATTATACTGCGGCAATTGATGTATGGTCTGTTGGTTGTATCTTCATGGAACTGATGGATCGGAAACCATTGTTCCCAGGCAGAGATCATGTGCATCAATTGCGTCTACTTATGGAG 762 0.4816 MEGGAAPPADAVMSDAAPPPQDHQHQHQQPAPPTTGVENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSDTNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREAFNDYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLME 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121224g00005 254 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Stsc121224g00005 254 Gene3D Transferase(Phosphotransferase) domain 1 144 254 - -
Stsc121224g00005 254 Gene3D Phosphorylase Kinase; domain 1 50 143 - -
Stsc121224g00005 254 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 65 254 - -
Stsc121224g00005 254 FunFam Mitogen-activated protein kinase 52 158 - -
Stsc121224g00005 254 MobiDBLite consensus disorder prediction 1 41 - -
Stsc121224g00005 254 SMART serkin_6 67 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121224g00005 254 ProSitePatterns Protein kinases ATP-binding region signature. 73 97 IPR017441 GO:0005524
Stsc121224g00005 254 FunFam Mitogen-activated protein kinase 138 253 - -
Stsc121224g00005 254 SUPERFAMILY Protein kinase-like (PK-like) 72 254 IPR011009 -
Stsc121224g00005 254 MobiDBLite consensus disorder prediction 21 41 - -
Stsc121224g00005 254 ProSiteProfiles Protein kinase domain profile. 67 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121224g00005 254 Pfam Protein kinase domain 72 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121224g00005 254 Pfam Protein kinase domain 145 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121224g00005 Stsc-Chr121224 44594 46559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121224g00005 1 254 MAP Kinase Gene Family AT2G43790 77.739 3.53e-156 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Stsc121224g00005 Pkinase 3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121224g00005 K14512 - qsa:O6P43_000016 455.677