Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121223g00001 ATGGATCCCTCTCGCCGAGCACCGCGCTCAGCGATCGACCCCGTTCCGAAGTTTCGCCAGGTCGGGTTCTTCACTCCTGGAGCCCCGCCCGAACGCTCTCAGTCGGGTCCACCCGACCCGACACATTCTCCTCCCGTCTCTGACGTCTCACCATCCGCCAACTCGCTTTCTCCGGTCATGATTCCACCGCCGCGCCACCTCTCCGACAATCTCGCCATCCACGCCCGTCCCACACTTGCGTCCCCTCTACGCGCTGAATCCCTCGCTGCTGGCGGCGGAGGCAGCAGCTTCGGCGATTTCTTCCCCGCTCCGATGTCGCCGGCGACTCAAGCCTCTTCTTCGTATTCCAGCAGGATGGCTGCTGGCGAAGGGAGCTTCTTTGACCGCCATGGCGTCCGAGGTGATAAGGGGAACAACAACGGCAAGGTGGCGTCGTCATTTCCCCGCGGAGGATTCGACCTAACGGCGATGAAGAAGGTTAGTGGTGGCGGCGGCGGCGGCGGTAGTGGTGCTGGTGTTCCGGCAAGCGAGCTGACCACAGTGTCCGTGGTTAATGATTCGCTAGCCATTCATGAAAAAGAGAAAGCAAACAGAGGAGGAGGGTCAGCTGTGGAAGCAAAAGATCAGTCTACTGGTTCAAAACAACAAAAACCAAAGACCACAAAAGCTGAAAGGCGAGCTCTTCAAGAATCCCAACGTGCCGCAAAGGCTGCTGCAAAAGCTGAAGGCAATAAGGCATCTGGAACTGCAACTTCAGCGAATGCAAAACCAGCCAAAGCTGTGAAGCCCACACCAAAAGTTGATAATGCTGCAGTTGCAGCATCTGAGAAGAAGGGTGGCGATTGTCCTCCTGAAAAGGATAGAAAGAAAGATGTTCCTCAACCACGAATGCAATATGATGACAAGAGTCGAGTGGAGAAAGCTAAGCGACGTGCCATGGTGAAACAAACTGAAGCTAGGAACAGAGTTGAGTTGTTCAGGCATTTACCACAATATGAACACGGAAGTCAGCTTCCAGATCTTGAGTCAAAGTTTTTTCATCTGGACCCTGTACATCCAACTGTTTATAAGGTGGGTTTGCAGTATCTGTCTGGAGATATATGTGGTGCTAATGCTCGTTGTATTGCCATGTTGCAAGCATTTCAAGAAGCCATAAAAGACTATAGGGTTCCACCTGAGAAGACTCTTGTGAGAGACTTAACAGCAAAAATAGGTAGTTATGTTTCATTTCTAAATGAGTGTAGGCCTATTTCAATCAGCATGGGAAATGCAATTAGATTTCTCAAAAGTCGGATAGCCAAGCTACCTTTGACCGTGTCTGAGTCAGAAGCCAAAGTTTCTCTTCAGTCAGATATTGAGCGTTTTATAAGTGAGAAGATTATACTTGCCAACAAGGTGATAGTCAAGCATGCTGTCACCAAAATAAGAGATGGTGATGTTCTTCTAACTTATGGGTCATCTTCGGCAGTTGAAATGATACTGTTACATGCACATGAATTGGGAAAACAGTTTCGTGTTGTTGTAGTTGATTCTCGTCCAAAGCTTAGAGGGCAGATTTTACTTCGCAGGCTTCTGGAGAAGGGTCTTAACTGTGAATACACTCATATAAATGCTGTTTCATACATAATGCATGAAGTTACCCGAGTTTTTCTGGGTGCTTCGTCAGTGTTGTCTAATGGAACAGTATATTCAAGGGTTGGGACTGCATGTGTTGCAATGGTTGCTCATGAGTTCCGTGTACCTGTCATAGTATGTTGTGAGGCCTATAAATTTCACGAAAGGGTACAGCTGGATTCGATATGCTCAAATGAACTTGGTGACCCAGATATAATTTCAAATGTTCGGGGTAGAGAGGGTGTCAACTACCTGGATGGTTGGGCCAATGTTGAAAATCTACAACTTTTAAATCTGATTTATGATGCAACACCTTCAGATTATGTTTCAATGATAGTCACAGATTATGGCATGGTGCCCCCAACAAGTGTTCCTGTAATTGTGAGAGAATATGGAAGAGAGCAGGTGTGGATTTAA 2031 0.4766 MDPSRRAPRSAIDPVPKFRQVGFFTPGAPPERSQSGPPDPTHSPPVSDVSPSANSLSPVMIPPPRHLSDNLAIHARPTLASPLRAESLAAGGGGSSFGDFFPAPMSPATQASSSYSSRMAAGEGSFFDRHGVRGDKGNNNGKVASSFPRGGFDLTAMKKVSGGGGGGGSGAGVPASELTTVSVVNDSLAIHEKEKANRGGGSAVEAKDQSTGSKQQKPKTTKAERRALQESQRAAKAAAKAEGNKASGTATSANAKPAKAVKPTPKVDNAAVAASEKKGGDCPPEKDRKKDVPQPRMQYDDKSRVEKAKRRAMVKQTEARNRVELFRHLPQYEHGSQLPDLESKFFHLDPVHPTVYKVGLQYLSGDICGANARCIAMLQAFQEAIKDYRVPPEKTLVRDLTAKIGSYVSFLNECRPISISMGNAIRFLKSRIAKLPLTVSESEAKVSLQSDIERFISEKIILANKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGKQFRVVVVDSRPKLRGQILLRRLLEKGLNCEYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHEFRVPVIVCCEAYKFHERVQLDSICSNELGDPDIISNVRGREGVNYLDGWANVENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWI 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121223g00001 676 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 49 673 - -
Stsc121223g00001 676 MobiDBLite consensus disorder prediction 156 175 - -
Stsc121223g00001 676 Gene3D - 462 669 IPR042529 -
Stsc121223g00001 676 Pfam Initiation factor 2 subunit family 368 659 IPR000649 GO:0044237
Stsc121223g00001 676 MobiDBLite consensus disorder prediction 1 65 - -
Stsc121223g00001 676 MobiDBLite consensus disorder prediction 31 45 - -
Stsc121223g00001 676 MobiDBLite consensus disorder prediction 189 314 - -
Stsc121223g00001 676 SUPERFAMILY NagB/RpiA/CoA transferase-like 326 669 IPR037171 -
Stsc121223g00001 676 MobiDBLite consensus disorder prediction 279 314 - -
Stsc121223g00001 676 MobiDBLite consensus disorder prediction 126 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121223g00001 Stsc-Chr121223 5537 10761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121223g00001 4 676 Eukaryotic Initiation Factors Gene Family AT5G38640 63.982 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121223g00001 K03680 - gmx:100775998 1038.1