Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121221g00004 ATGGCTGAAGCACTTGTTGTTGGAGCTTTTCTTTCTGGCTTCGCGAACGTTGTTATTGACAGGCTCATTTCAACTGAGTTTGTTAACTTGGTGGTGGGCAAGAAGCTGAACCGACAGTTGGTTGAAAGGCTCAAGACTGCTCTCTTGGCTGCCAAAGCTCTCGCTGCTGACGCTGAGCAGAAGCAGTTTGGAAATGAACTTGTGAAGGAATGGCTTGATAGTCTCAGGGATGCTCTCTACACTGCTGATGACTTGCTGGATCATGTCTTCATCAAAGCTGAAATTCGCAGCAAGGTACGCTCTCGCCTTCCTCGCTTCCTTAATATGTCTAATTCGAAGACGGTGACTAAGATAGAAGAGGTGGTTAAAAGAATAGAAGATCTTCAGAAACTCAAAGATACCCTTGGTCTCAAAGAGATTCCAACAGGTAGCTCCTCATGGAGACCGCCATCTACTTCTCTTGAAAGAGGGACTGTGTATGGCAGGGATGATGACAAACAGGCCTTAATCAAGATGCTAATTGACAACAATGATCATAAGTTGTCTGTCATCTCTATTGTAGGTATGGGCAGGGTTGGTAAAACTACTTTAGCACAATGCCTGTACAACAATGAAGATCTGATGAAGGGGTTTGATCTGAAAGCTTGGATTTGTGTTTCTGAAAATTTTGATGTCGTTGAGACTACGAAGAATGTTATAAAGGAGATCACTTCTGGTTTTTGTAGTCTTGACGGCTTCAATTTACTTCAACATGATTTGAAGGAAAAACTGTCAGAAAAGAAGTTCTTTGTTGTTTTGGACGATATTTGGAGCAATGATGGCGACAAGTGGAAAAGCTTTATCACTCCTTTTCAAGATGGGAGAAAGGGAAGCACTGTTCTTCTAACTACTCGCAAGGAAAATGTTGGTCCAATAGTCCAAAATTATAACTCTTACTTTCTCAATGGACTGTCAGATGATTATTGCTGGTCTATTTTTGCGGACAATTCATCCTTTCCTGAATCAAATGGGAGTTCAGAACTGGAAGGAATAGGTAGAATGATTGTCAAGAAGTGTGATGGCTTGCCCTTAGCTGCAGAGACACTCGGACTCTTGTTGCGCTCGAAGCATGATGTTGAGGAATGGAATATGATACTATTGAGTGACATTTGGGAATTTCCTGTGACAGATAGTAAGATTCTTCCTGCATTGTTAATAAGTTACTATCATCTGCCTGCATATTTAAAACGATGCTTTGTTTATTGTTCATTGTATCCCAAAGATCATAAATTTGATAAGGATGAATTAATCTTGCTATGGATGGCTGAAGATCTTTTACGACCACGAAAGAGGAGAGAGACTTTTGAAGAAGTTGGTCGTGAGTGTTTTGATGACTTGGCTTCAAGACTGCTTTTCAAGCAGGTTGAACATAGTGAGAAGTATTTTGTGATGCATGATCTCATGCATGACCTGGCAACTTTTCTTGCTGGAGAATTTTATTGCAGATTATCAGAAGAACTTGGTGAAAACGAAGACATGAGGATTCTAACTCGTCATTTGTCATGCGATTATCCAATCTTTGAAAAATTCTATTCCTCTAGTAGAATAGAATCTTTGAGGACATTCTTGTTTATCAGTAATGCTCAATTTCATGATAGGAACGAAAGCACAAGGTTAACATGTGACATATTGTCAAAGAATAAATACTTGAGAGTTTTATCCTTTGATGAACTTGCTATATTTCCTGATTCAATGGGAAAATTGATCCACTTGCGCTACTTGAGTCTCTCTCAAACTAATATTAAGACATTGCCGGAGTCACTTTGCAAGTTGTATAATCTGCAAACATGA 1830 0.3956 MAEALVVGAFLSGFANVVIDRLISTEFVNLVVGKKLNRQLVERLKTALLAAKALAADAEQKQFGNELVKEWLDSLRDALYTADDLLDHVFIKAEIRSKVRSRLPRFLNMSNSKTVTKIEEVVKRIEDLQKLKDTLGLKEIPTGSSSWRPPSTSLERGTVYGRDDDKQALIKMLIDNNDHKLSVISIVGMGRVGKTTLAQCLYNNEDLMKGFDLKAWICVSENFDVVETTKNVIKEITSGFCSLDGFNLLQHDLKEKLSEKKFFVVLDDIWSNDGDKWKSFITPFQDGRKGSTVLLTTRKENVGPIVQNYNSYFLNGLSDDYCWSIFADNSSFPESNGSSELEGIGRMIVKKCDGLPLAAETLGLLLRSKHDVEEWNMILLSDIWEFPVTDSKILPALLISYYHLPAYLKRCFVYCSLYPKDHKFDKDELILLWMAEDLLRPRKRRETFEEVGRECFDDLASRLLFKQVEHSEKYFVMHDLMHDLATFLAGEFYCRLSEELGENEDMRILTRHLSCDYPIFEKFYSSSRIESLRTFLFISNAQFHDRNESTRLTCDILSKNKYLRVLSFDELAIFPDSMGKLIHLRYLSLSQTNIKTLPESLCKLYNLQT 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121221g00004 609 FunFam Probable disease resistance protein At1g63360 401 487 - -
Stsc121221g00004 609 Gene3D - 151 311 IPR027417 -
Stsc121221g00004 609 Coils Coil 41 61 - -
Stsc121221g00004 609 PRINTS Disease resistance protein signature 256 270 - -
Stsc121221g00004 609 PRINTS Disease resistance protein signature 183 198 - -
Stsc121221g00004 609 PRINTS Disease resistance protein signature 579 595 - -
Stsc121221g00004 609 PRINTS Disease resistance protein signature 352 366 - -
Stsc121221g00004 609 Pfam NB-ARC domain 163 378 IPR002182 GO:0043531
Stsc121221g00004 609 Gene3D Ribonuclease Inhibitor 527 609 IPR032675 -
Stsc121221g00004 609 Gene3D - 17 135 - -
Stsc121221g00004 609 FunFam Probable disease resistance protein At1g61300 148 309 - -
Stsc121221g00004 609 Pfam Rx N-terminal domain 38 97 IPR041118 -
Stsc121221g00004 609 PANTHER DISEASE RESISTANCE PROTEIN RP 45 609 IPR044974 GO:0006952
Stsc121221g00004 609 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 415 IPR027417 -
Stsc121221g00004 609 Gene3D - 400 487 IPR036388 -
Stsc121221g00004 609 SUPERFAMILY L domain-like 476 609 - -
Stsc121221g00004 609 Gene3D - 316 399 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121221g00004 Stsc-Chr121221 10192 12021 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121221g00004 154 380 WRKY Transcription Factor Family AT5G45050 23.109 3.50e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121221g00004 - - aip:107624780 983.015