Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121221g00003 ATGTCATTTGATGGGGATAGTTTATCACTCGAGGGATTTGAATCGTTGGTGGAGTCTGCATTTAAGGCAAGGATCTTCCACCATCTAACATCCCTCCAAGAAATAACCATCTTTGAGTGTTTTTCTGCTGTATCCTTTCCAGCCAATTGTTTACCCGAACGTTTACAAAAGCTGCAAATCAAGAATTGCAAAAAACTGGCCTCATTGTCGTTGGATGCCTTTCCCAATGTCAAAAATCTCCGGCTAGAACATTGTTTGAATCTGGAATCAATTTCAATGTCAGAGTCACCACACACTGCTCTTCAAAGCCTCAAAATCATTGGGTGCCACAAATTAGTGTCATTATCAGAAGAAGGGCAGGCTGCACCAAACTTGACTCATCTCCTTATCAATTCCTGTCCCAAGTTGGAGGCATTGCCGCGTAACATGGATACTCTTCTCCCAAATTTACAGTTTCTGGAGATAGAAGAATGCGGAGGAATTTGTAGGTTTCCAGAGGGTGGTTTGCCACCTAACATGGAAACACTTTGTATGAGTGGTTATGAGGAACAATTGAGGGATCTTTCCTCGAACGGGAAATTGGAAGCCCTCAAGCATCTCGTGATTAATGGTCGCGACTGTGAGAGAGTGAAGTCATTCCCAGAGGTGGTGGATTTGCTGCCTCACCTTCCCTCCCTTACCACTCTGTGTTTTGAGGAATTTGATGACCTGGAGACGTTGGAGTGCAACCAGCTTCTCCGTCTCACCTCCCTCCAACATTTACTCATTCTTTCATGTCCGAAACTGAAGAATATACCAGGGAGAAGTGGGAGGAGAGGGAGGAGAAGTGGGATAGGCGCAGAGATATGGCTTCATGTTTTTGAGAAGCAAAGACACTTGCAGAAAGTTGGAGTGGCACTCATTATTGACAAGCTTCTCTTGTTGAATGAACAATTTGATGAAGAGAACAAAGAAAGAGAAGGTGATCAGCACTACTACCCTTCAGATGCTGCTGATGGCAATTCAGATTATGATCTGCTTAGTCCTTTAATGTGGGCTCATGGAAATAGTATGTTCAACATTCTTGTGTGA 1071 0.437 MSFDGDSLSLEGFESLVESAFKARIFHHLTSLQEITIFECFSAVSFPANCLPERLQKLQIKNCKKLASLSLDAFPNVKNLRLEHCLNLESISMSESPHTALQSLKIIGCHKLVSLSEEGQAAPNLTHLLINSCPKLEALPRNMDTLLPNLQFLEIEECGGICRFPEGGLPPNMETLCMSGYEEQLRDLSSNGKLEALKHLVINGRDCERVKSFPEVVDLLPHLPSLTTLCFEEFDDLETLECNQLLRLTSLQHLLILSCPKLKNIPGRSGRRGRRSGIGAEIWLHVFEKQRHLQKVGVALIIDKLLLLNEQFDEENKEREGDQHYYPSDAADGNSDYDLLSPLMWAHGNSMFNILV 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121221g00003 356 SUPERFAMILY L domain-like 26 265 - -
Stsc121221g00003 356 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 72 222 IPR039203 GO:0050832
Stsc121221g00003 356 Gene3D Ribonuclease Inhibitor 7 98 IPR032675 -
Stsc121221g00003 356 Gene3D Ribonuclease Inhibitor 123 271 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121221g00003 Stsc-Chr121221 5099 8404 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121221g00003 26 249 WRKY Transcription Factor Family AT4G12020 25.431 6.73e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121221g00003 - - aip:107622623 287.345