Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121211g00005 ATGCTTATGATATGCCCTATTGTGCAACAATGTTTAGGCAGCCCTGTTCTTGGCTACTTGGCTGCTGGAATCTTAATTGGGCCTTATGGTCTCTCTATAATTCGACATGTTCATGGGACAAAGGCAATTGCTGAATTTGGTGTTGTTTTCCTTTTATTCAACATTGGCCTGGAGCTCTCTGTTGAAAGACTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCAACACAGGTTTTGGCCACTGCTGTAGTTGTCGGCTTGGTGGCTCGTATTTGTGGCCAAGCTGGTCCTGCTGCTATTGTCATTGGGAATGGCCTGGCATTATCATCGACTGCTGTTGTTCTGCAGGTGTTGCAGGAGAGAGGTGAGAGCACATCACGGCATGGACGAGCTACATTCTCTGTTTTACTTTTTCAGGATTTGGCAGTTGTGGTTTTGCTGATACTTATTCCTCTAATTTCACCCAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCATTGCTGAAGCTCTTGGGTTGGCTGCTGTTAAGGCAGCTGTTGCCATTACTGCCATAATCGCAGGTGGACGATTGCTCCTTCGACCAATATATAAGCAGGTTGCAGAAAATCAAAATGCCGAAATATTCTCGGCTAACACACTACTTGTTATTCTTGGGACCAGTCTTCTTACAGCCAGGGCAGGGCTTTCAATGGCATTGGGAGCATTTTTGGCTGGTTTACTACTGGCGGAAACTGAATTTTCGTTACAGGTTGAATCTGATATTGCTCCATACCGTGGCCTTCTTTTGGGGTTATTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAACTTCCCAGTTATCACCACCACACTGGGACTGTTAATATGCGGCAAGACTCTCTTGGTTGCTGTCATCGGTAAAGTCTTTGGGATTTCTATCATTTCTGCCATAAGAACTGGCCTTCTTCTCGCTCCTGGTGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTCAATCAGGTTTTTGTCCTCAAACATGTTTCTTCTACGAGAGTAGTGTGCTCATATTTTACTCCAGTCTCCAGGCCTTCTTATTCATGTAAAATAAGTCACTTGGCTGGAGTTTGTATAACAAATGGATGA 1143 0.4366 MLMICPIVQQCLGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSTQVLATAVVVGLVARICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVITTTLGLLICGKTLLVAVIGKVFGISIISAIRTGLLLAPGGEFAFVAFGEAVNQVFVLKHVSSTRVVCSYFTPVSRPSYSCKISHLAGVCITNG 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121211g00005 380 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 4 276 IPR004771 GO:0006812|GO:0008324|GO:0016020
Stsc121211g00005 380 FunFam K(+) efflux antiporter 2 chloroplastic 1 359 - -
Stsc121211g00005 380 Pfam Sodium/hydrogen exchanger family 4 347 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc121211g00005 380 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 2 351 - -
Stsc121211g00005 380 Gene3D - 2 368 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121211g00005 Stsc-Chr121211 40158 44707 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121211g00005 2 349 Inorganic Solute Cotransporters AT4G00630 84.211 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121211g00005 K03455 - gmx:100818163 528.094