Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121206g00010 ATGGAGTTGGATCTTTCATACAACATCAGCATCTCACCTTTGCCTGGTTTTCTCTGGTTTGAATGGTTCCTCATTTTTACATTTGTCTCTGAGGGGATCTTTGGGGTTATAACTTATAAGATGGATGAAGATAGCAGCAATTCTTGGTTAAGGAGGGCTAAGTTCTCTCACACAGTGTGTCACCGATTGGAGTATTCCAGATTGGACTCTTTTCCTAGCAGCATTCAGCGCCAGCAGAACTCTGGGACTCTGAAATCAAGGCCTGCAGCAGCACAACCAGCGCTGGCACCGGCGCGGGCACCTACAGTTCCTTATGCTCTAAACCCTGTATCTAATGTGTCACAGGTTCAGAGAAATCCAATAACGAATAAGCAGAGATCTTTGTCCCCTTTGCCGGTAACCCTTCTGTCTGATACGTTTAAGGAAGCCCAGCATGAGCAGAAGAGGTTCTCAACTCCAACCACTCCGCGGAGGAAAGACCAGGAGAAGAGAATTATGGGGAAATTAATGAACCGGGACTCTAAGGACTCAAGAGAAACGAAGGTGTTGTCGAATTCAAAATCGCCTCATCGTAGTCCAAATGGGCAGCTTGCATCCATGATTTTGGGAGACAAGTCAAAGCACCGCAAGGAATCTGCGTGGACGAAGTATTTTGACCATGCTGGAGGAAGGGTCACCGCTGTGGAAACGGCTGAAGAGTGGACTGTGGATCTCTCTAAGCTGTTCCTTGGTCTCAGATTCGCTTATGGGGCTCACAGTCGGCTTTACCATGGTATGTACAACGAAGAGCCCGTTGCTGTGAAGATTATCCGGGTTCCAGATGATGACGAAAATGGAAACATGGCTTATCGATTGGAGAATCAGTTCATTAGAGAGGTCTCACTTTTGTCTCGTCTCCACCATCAGAATGTTATAAAGTTTGTAGCAGCGTGCAGAAAACCACCTGTTTATTGTGTTATCACTGAATATCTAGCAGAAGGTTCCTTAAGGGCATATTTGCATAAATTGGAGAAGAAGACTATTTCTATGCAGAAGCTAATTGCTTTTGCTCTGGATATCGCACGTGGGATGGAATATATACACTCTCAAGGTGTCATTCATAGAGACCTTAAGCCAGAGAACGTCCTTATTAGCGAAGACTTTCACCTTAAAATTGCTGATTTTGGGATTGCTTGTGAGGAAGCATATTGCGACCTATTAGCTGACGACCCTGGTACGTACCGCTGGATGGCACCTGAGATGATCAAGCGTAAATCCTATGGAAGAAAGGTTGATGTATATAGCTTTGGGCTTATCCTATGGGAAATGGTAACTGGGACAATACCATATGAGGATATGACTCCCATCCAGGCTGCTTTTGCAGTGGTAAATAAGAATTCAAGGCCTATTATTCCTTCCAATTGCCCTCCTGCAATGCGCGCTTTAGTCGAGCAATGTTGGTCTGTGCATCCAGACAAGAGGCCTGAGTTCTGGCAGGTTGTTAAGGTGTTAGAACAATTCGAATCATCACTTGCACTGGACGGAACCTTGACTCTGGTTCAAAACCCTTTGTGTCAAGATCATAAGAAAGGTCTTCTTCATTGGATTCAGAAGCTTAGTCCTGCTCACCAGAATAGTGGTCCAGCACTTAAACCTAGATTCTCATGA 1647 0.4511 MELDLSYNISISPLPGFLWFEWFLIFTFVSEGIFGVITYKMDEDSSNSWLRRAKFSHTVCHRLEYSRLDSFPSSIQRQQNSGTLKSRPAAAQPALAPARAPTVPYALNPVSNVSQVQRNPITNKQRSLSPLPVTLLSDTFKEAQHEQKRFSTPTTPRRKDQEKRIMGKLMNRDSKDSRETKVLSNSKSPHRSPNGQLASMILGDKSKHRKESAWTKYFDHAGGRVTAVETAEEWTVDLSKLFLGLRFAYGAHSRLYHGMYNEEPVAVKIIRVPDDDENGNMAYRLENQFIREVSLLSRLHHQNVIKFVAACRKPPVYCVITEYLAEGSLRAYLHKLEKKTISMQKLIAFALDIARGMEYIHSQGVIHRDLKPENVLISEDFHLKIADFGIACEEAYCDLLADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAFAVVNKNSRPIIPSNCPPAMRALVEQCWSVHPDKRPEFWQVVKVLEQFESSLALDGTLTLVQNPLCQDHKKGLLHWIQKLSPAHQNSGPALKPRFS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121206g00010 548 PRINTS Tyrosine kinase catalytic domain signature 321 334 IPR001245 GO:0004672|GO:0006468
Stsc121206g00010 548 PRINTS Tyrosine kinase catalytic domain signature 468 490 IPR001245 GO:0004672|GO:0006468
Stsc121206g00010 548 PRINTS Tyrosine kinase catalytic domain signature 424 446 IPR001245 GO:0004672|GO:0006468
Stsc121206g00010 548 PRINTS Tyrosine kinase catalytic domain signature 359 377 IPR001245 GO:0004672|GO:0006468
Stsc121206g00010 548 PRINTS Tyrosine kinase catalytic domain signature 405 415 IPR001245 GO:0004672|GO:0006468
Stsc121206g00010 548 SUPERFAMILY Protein kinase-like (PK-like) 222 497 IPR011009 -
Stsc121206g00010 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 365 377 IPR008271 GO:0004672|GO:0006468
Stsc121206g00010 548 ProSiteProfiles Protein kinase domain profile. 241 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121206g00010 548 Pfam Protein tyrosine and serine/threonine kinase 249 497 IPR001245 GO:0004672|GO:0006468
Stsc121206g00010 548 FunFam serine/threonine-protein kinase HT1 326 519 - -
Stsc121206g00010 548 Gene3D Transferase(Phosphotransferase) domain 1 325 523 - -
Stsc121206g00010 548 MobiDBLite consensus disorder prediction 74 95 - -
Stsc121206g00010 548 CDD STKc_MAP3K-like 250 497 - -
Stsc121206g00010 548 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 108 502 - -
Stsc121206g00010 548 MobiDBLite consensus disorder prediction 142 185 - -
Stsc121206g00010 548 SMART serkin_6 241 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121206g00010 548 Gene3D Phosphorylase Kinase; domain 1 229 324 - -
Stsc121206g00010 548 MobiDBLite consensus disorder prediction 142 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121206g00010 Stsc-Chr121206 28140 32138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121206g00010 41 536 MAP Kinase Kinase Kinase AT5G58950 58.090 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc121206g00010 PK_Tyr_Ser-Thr 2.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121206g00010 - - gmx:100784454 784.252