Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121206g00009 ATGGATGAAGATAGCAGCAATTCTTGGTTAAGGAGGGCTAAGTTCTCTCACACAGTGTGTCACCGATTGGAGTATTCCAGATTGGACTCTTTTCCTAGCAGCATTCAGCGCCAGCAGAACTCTGGGACTCTGAAATCAAGGCCTGCAGCAGCACAACCAGCGCTGGCACCGGCGCGGGCACCTACAGTTCCTTATGCTCTAAACCCTGTATCTAATGTGTCACAGGTTCAGAGAAATCCAATAACGAATAAGCAGAGATCTTTGTCCCCTTTGCCGGTAACCCTTCTGTCTGATACGTTTAAGGAAGCCCAGCATGAGCAGAAGAGGTTCTCAACTCCAACCACTCCGCGGAGGAAAGACCAGGAGAAGAGAATTATGGGGAAATTAATGAACCGGGACTCTAAGGACTCAAGAGAAACGAAGGTGTTGTCGAATTCAAAATCGCCTCATCGTAGTCCAAATGGGCAGCTTGCATCCATGATTTTGGGAGACAAGTCAAAGCACCGCAAGGAATCTGCGTGGACGAAGTATTTTGACCATGCTGGAGGAAGGGTCACCGCTGTGGAAACGGCTGAAGAGTGGACTGTGGATCTCTCTAAGCTGTTCCTTGGTCTCAGATTCGCTTATGGGGCTCACAGTCGGCTTTACCATGGTATGTACAACGAAGAGCCCGTTGCTGTGAAGATTATCCGGGTTCCAGATGATGACGAAAATGGAAACATGGCTTATCGATTGGAGAATCAGTTCATTAGAGAGGTCTCACTTTTGTCTCGTCTCCACCATCAGAATGTTATAAAGTTTGTAGCAGCGTGCAGAAAACCACCTGTTTATTGTGTTATCACTGAATATCTAGCAGAAGGTTCCTTAAGGGCATATTTGCATAAATTGGAGAAGAAGACTATTTCTATGCAGAAGCTAATTGCTTTTGCTCTGGATATCGCACGTGGGATGGAATATATACACTCTCAAGGTGTCATTCATAGAGACCTTAAGCCAGAGAACGTCCTTATTAGCGAAGACTTTCACCTTAAAATTGCTGATTTTGGGATTGCTTGTGAGGAAGCATATTGCGACCTATTAGCTGACGACCCTGGTACGTACCGCTGGATGGCACCTGAGATGATCAAGCGTAAATCCTATGGAAGAAAGGTTGATGTATATAGCTTTGGGCTTATCCTATGGGAAATGGTAACTGGGACAATACCATATGAGGATATGACTCCCATCCAGGCTGCTTTTGCAGTGGTAAATAAGAATTCAAGGCCTATTATTCCTTCCAATTGCCCTCCTGCAATGCGCGCTTTAGTCGAGCAATGTTGGTCTGTGCATCCAGACAAGAGGCCTGAGTTCTGGCAGGTTGTTAAGGTGTTAGAACAATTCGAATCATCACTTGCACTGGACGGAACCTTGACTCTGGTTCAAAACCCTTTGTGTCAAGATCATAAGAAAGGTCTTCTTCATTGGATTCAGAAGCTTAGTCCTGCTCACCAGAATAGTGGTCCAGCACTTAAACCTAGATTCTCATGA 1527 0.4558 MDEDSSNSWLRRAKFSHTVCHRLEYSRLDSFPSSIQRQQNSGTLKSRPAAAQPALAPARAPTVPYALNPVSNVSQVQRNPITNKQRSLSPLPVTLLSDTFKEAQHEQKRFSTPTTPRRKDQEKRIMGKLMNRDSKDSRETKVLSNSKSPHRSPNGQLASMILGDKSKHRKESAWTKYFDHAGGRVTAVETAEEWTVDLSKLFLGLRFAYGAHSRLYHGMYNEEPVAVKIIRVPDDDENGNMAYRLENQFIREVSLLSRLHHQNVIKFVAACRKPPVYCVITEYLAEGSLRAYLHKLEKKTISMQKLIAFALDIARGMEYIHSQGVIHRDLKPENVLISEDFHLKIADFGIACEEAYCDLLADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAFAVVNKNSRPIIPSNCPPAMRALVEQCWSVHPDKRPEFWQVVKVLEQFESSLALDGTLTLVQNPLCQDHKKGLLHWIQKLSPAHQNSGPALKPRFS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121206g00009 508 Pfam Protein tyrosine and serine/threonine kinase 209 457 IPR001245 GO:0004672|GO:0006468
Stsc121206g00009 508 MobiDBLite consensus disorder prediction 102 145 - -
Stsc121206g00009 508 Gene3D Transferase(Phosphotransferase) domain 1 285 483 - -
Stsc121206g00009 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 325 337 IPR008271 GO:0004672|GO:0006468
Stsc121206g00009 508 MobiDBLite consensus disorder prediction 102 158 - -
Stsc121206g00009 508 FunFam Serine/threonine-protein kinase isoform 1 191 285 - -
Stsc121206g00009 508 ProSiteProfiles Protein kinase domain profile. 201 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121206g00009 508 PRINTS Tyrosine kinase catalytic domain signature 365 375 IPR001245 GO:0004672|GO:0006468
Stsc121206g00009 508 PRINTS Tyrosine kinase catalytic domain signature 319 337 IPR001245 GO:0004672|GO:0006468
Stsc121206g00009 508 PRINTS Tyrosine kinase catalytic domain signature 384 406 IPR001245 GO:0004672|GO:0006468
Stsc121206g00009 508 PRINTS Tyrosine kinase catalytic domain signature 281 294 IPR001245 GO:0004672|GO:0006468
Stsc121206g00009 508 PRINTS Tyrosine kinase catalytic domain signature 428 450 IPR001245 GO:0004672|GO:0006468
Stsc121206g00009 508 SUPERFAMILY Protein kinase-like (PK-like) 182 457 IPR011009 -
Stsc121206g00009 508 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 68 462 - -
Stsc121206g00009 508 FunFam serine/threonine-protein kinase HT1 286 479 - -
Stsc121206g00009 508 Gene3D Phosphorylase Kinase; domain 1 189 284 - -
Stsc121206g00009 508 MobiDBLite consensus disorder prediction 34 54 - -
Stsc121206g00009 508 CDD STKc_MAP3K-like 210 457 - -
Stsc121206g00009 508 SMART serkin_6 201 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121206g00009 Stsc-Chr121206 28140 32138 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121206g00009 1 496 MAP Kinase Kinase Kinase AT5G58950 58.090 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc121206g00009 PK_Tyr_Ser-Thr 2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121206g00009 - - gmx:100784454 784.252