Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121202g00002 ATGAAGTCATCACAAGTAATAGTGAGCATGTTAATGGTGCAAATATTTGCAACTGGTATGCAGCTTCTATCAAGAGTAATATTGGTTAATGGCACCTTCATTTTCGCACTCACTGCTTATCGCCATATCGTTGCTGCTCTTTGCGTTGCCCCTTTCGCTCTTTACTTTGAGAGGGGCAGGGAAAAGAAGTTCACTTTCAAAGTTTGGTTTTGGATCTTCGTTAACGCTTTAGCTGGAATGACAATGGCTCAGGGATTGTTCTATTATGGTTTGAGGGACACTTCAGCTACTTACTCTATCAACTTTCTCAACTTGGTTCCTATTTGCACATTTGCTATCTCTATTATATGCAGAATGGAGAAAGTGAGAGTGAAAACGTGGGATGGTAAAGCAAAGTGTGTGGGAGCGATATTGTGTGTTGGAGGTGCATTGGTTACAAGCCTTTACAAAGGGCATGAATTCTTCATTGGTCACCACAACCATGGCCACCATGATTCTCATCCTTCTCCTTTTATGACTCACAAGACCAACATGCTTCGTGGAACTATCTTCTTGGTTCTTAGCTGCTTCTCATACACAGCTTGGTTCATTACCCAAGGAGCACTTGCTACGGCTGCAACATTTTCTTTACTTTCATGGGCTATTTCAGTAAAAGGACCAACATACCCTCCAATGTTTAATCCCCTTGCTCTTACTTTTGTGGCCATATCAGAAGCTCTCCTACTTGGTGAACCATTAAAAGTTGGAACGCTGCTGGGGATGGTTATGATAATATCAGGATTGTACTCATTCTTGTGGGGCAAAATGAAGGAACCAAAATGCTTGGCACAATCAAATGTGGTAGCAGCAGAAGTGTCAACAAACATGGTTGCTGAGCCTGCAGGGCCACAAGCAACTGCTGTTGTAGTACCAAGTGCTTCTTCACCTAATAACAATGTGGTTTTAGAGGTAGAAACTACTACCAAGTAG 969 0.4221 MKSSQVIVSMLMVQIFATGMQLLSRVILVNGTFIFALTAYRHIVAALCVAPFALYFERGREKKFTFKVWFWIFVNALAGMTMAQGLFYYGLRDTSATYSINFLNLVPICTFAISIICRMEKVRVKTWDGKAKCVGAILCVGGALVTSLYKGHEFFIGHHNHGHHDSHPSPFMTHKTNMLRGTIFLVLSCFSYTAWFITQGALATAATFSLLSWAISVKGPTYPPMFNPLALTFVAISEALLLGEPLKVGTLLGMVMIISGLYSFLWGKMKEPKCLAQSNVVAAEVSTNMVAEPAGPQATAVVVPSASSPNNNVVLEVETTTK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121202g00002 322 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 140 - -
Stsc121202g00002 322 SUPERFAMILY Multidrug resistance efflux transporter EmrE 181 270 - -
Stsc121202g00002 322 Pfam EamA-like transporter family 8 146 IPR000620 GO:0016020
Stsc121202g00002 322 PANTHER WAT1-RELATED PROTEIN 202 272 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121202g00002 Stsc-Chr121202 19909 31043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121202g00002 8 268 Nodulin-like Gene Family AT1G09380 30.154 6.39e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121202g00002 - - gmx:100792281 382.489