Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121198g00010 ATGAACACAGAAATGTCACAAAGTGAAGATGGAGAGATCAACATGGCAGCTTGGATTCTTGGTGTTAAAAATCTATCAATTCAACCATATCCACTTCCCTCTTTAGGTCCCCATGATGTCAAAATTAAGATTAAAGCTGTTGGTATTTGTGGAAGTGATGTTCATTACTATAAGACTATGAGATGTGCAAATTTTATTGCAAACAAGCCTATGGTTCTGGGGCATGAGTGTGCTGGAATCATACAAGAACTTGGCACTCAAGTTCAATCTCTTTCAGTAGGAGATAGGGTAGCCTTAGAGCCTGGAATCAGTTGCCAAACATGCAATTTCTGCAAAGGCGGCCGCTACAACCTCTGTCGCGGCATGAAATTTTTCGGATCAGCATCAACTCACGGTTCTCTTGCCAATATGGTGGTGCATCCTGCAAATCTGTGCTTCAAGCTACCTGACAATGTGAGCTTGGAGGAAGGAGCCATGATTGAGCCACTCAGTGTTGGAGTGCATGCGTGTCGCCGTGCGAATATCGGTCCGGACACAAATGTACTGATCATAGGAGCAGGACCAATTGGCCTTATAGTATCACTTGCTGCCAGGGCATTTGGATCACCAAGAATTGTCATGGTTGATGTTGATAACACTCGTTTATCAATTGCAAAAGATCTTGGTGCAGATGAAACTATCCTAGTTTCAACTAGTATCCAGGTTTTCACTCTATACTCTACAAATTTCACATTGCTTGGTGTGTAA 747 0.427 MNTEMSQSEDGEINMAAWILGVKNLSIQPYPLPSLGPHDVKIKIKAVGICGSDVHYYKTMRCANFIANKPMVLGHECAGIIQELGTQVQSLSVGDRVALEPGISCQTCNFCKGGRYNLCRGMKFFGSASTHGSLANMVVHPANLCFKLPDNVSLEEGAMIEPLSVGVHACRRANIGPDTNVLIIGAGPIGLIVSLAARAFGSPRIVMVDVDNTRLSIAKDLGADETILVSTSIQVFTLYSTNFTLLGV 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121198g00010 248 Gene3D - 10 176 - -
Stsc121198g00010 248 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Stsc121198g00010 248 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 230 IPR036291 -
Stsc121198g00010 248 SUPERFAMILY GroES-like 15 186 IPR011032 -
Stsc121198g00010 248 Pfam Alcohol dehydrogenase GroES-like domain 37 148 IPR013154 -
Stsc121198g00010 248 Gene3D - 177 237 - -
Stsc121198g00010 248 PANTHER SORBITOL DEHYDROGENASE 14 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121198g00010 Stsc-Chr121198 37846 40580 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121198g00010 13 235 Monolignol Biosynthesis Gene Families AT4G37980 25.847 4.73e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121198g00010 K00008 K19635 cave:132181067 377.867