Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121193g00007 ATGATGCAGGTTAAGTTGATGTGCTCCTATTGTAAGAAGCATGATGAAAGTGAAGTCCCTGATCCTTATTATGGTGGACCGCAGGGGTTTGAGAAGGTATTAGATTTGCTTGAAGATGCTTGCGGATCATTGCTGGACAATGTTTTGGCTGAAAATGATCGTTTACCACAATCCTAA 177 0.4124 MMQVKLMCSYCKKHDESEVPDPYYGGPQGFEKVLDLLEDACGSLLDNVLAENDRLPQS 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121193g00007 58 Pfam Low molecular weight phosphotyrosine protein phosphatase 3 45 IPR023485 -
Stsc121193g00007 58 Gene3D - 2 56 - -
Stsc121193g00007 58 SUPERFAMILY Phosphotyrosine protein phosphatases I 4 47 IPR036196 -
Stsc121193g00007 58 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 3 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121193g00007 Stsc-Chr121193 35430 36210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121193g00007 3 52 Protein tyrosine phosphatase (PTP) family AT3G44620 78.000 1.25e-23 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121193g00007 K25307 - twl:120001981 110.153