Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121193g00005 ATGATAGAATATATCAAAGGGCAGATCAGCTCTTACTTCACAGACAGTCTTTTGCGAATTGTTCGTGATATTGTTGTTCACATGAAAGGGGCGAGCAGATCAGAAGACGACCCAAATTCATCATCTGGCCTTCCTCAAATTGAGGGCGATCCCCATAGAGGGGATGCATCCTTGGAATTTATCAAGCATGTCTGTGCTGTGTTGGCCCTCGACCAAAGCGTGCAGCATGATGTTCTGGTCATGAGAAAGAATTTGTTAAAATACGTTCGTGTTAGGGAGTTTGCTCCGGAAGCTGAGTTTCGTGATCCATGCCATTCCTTCATCCTATCCAATGTCATTTGCAGCTATTGTAATGACTGCAGAGACTTGGATTTGTGCCGTGACTCGGGTTTATTGAGTCAGGAGTGGCGTTGTGGTGTGCTGCAGTGTGGGCAGCCATATGACAGGGAGGTGATGGAGAATGCTCTTGTTCAGATAGCACGCCAAAGAGAGCGGCTTTACCACCTTCAAGATCTGGTGTGCCTCAGGTGCAACCAAGTCAAAGCTGCACATTTGTCTGAGCAATGTGCATGTGCTGGCTCATTTAGGTGCAAGGAAGACGCAACTGAATTTCGCTCAAAGATGCAGGTTTTCTTCAATATAGCTTTGCGTCAGAAATTCCAACTTCTCCAGGAATGTACTTCTTGGATTTTAGAACTTAGATTGTAA 708 0.4548 MIEYIKGQISSYFTDSLLRIVRDIVVHMKGASRSEDDPNSSSGLPQIEGDPHRGDASLEFIKHVCAVLALDQSVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCHSFILSNVICSYCNDCRDLDLCRDSGLLSQEWRCGVLQCGQPYDREVMENALVQIARQRERLYHLQDLVCLRCNQVKAAHLSEQCACAGSFRCKEDATEFRSKMQVFFNIALRQKFQLLQECTSWILELRL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121193g00005 235 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 2 232 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121193g00005 Stsc-Chr121193 13552 15183 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121193g00005 1 231 Core DNA Replication Machinery Family AT2G27120 53.879 2.75e-77 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121193g00005 K02324 - cave:132164156 385.956