Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121193g00004 ATGGAGGAGGAGTTTAACTTCTTAGGATTTGGCTCAGTAGCAGCAGTACTAGTACTTCTTTTCTGTGGATGGAAGCTGCTCAACTCCTTCTTCCTCACACCTAAGAAGCTTGAGAGCCTTCTCAGGAAACAAGGCTACCATGGTGATCCCTACACCCTCTTCCCCAACAACTCCTCCTCTTCTTCTAATAATAAGAGTAGTCTCTCTGACGACAAGGACATAGCTCCACGTGTCTCGTGTCAAGGCGATCATGCAATCAACAAATTTGGCTACAACTCATTTTATTGGGAAGGTCACACACTCAAGGTGAACATCACAAACCCCGATCACATTAAACGAGTCCTTACCAATAACACCTTCTTCAAGAAAGAGAAGCTCAAGCTCAAGCGCGTTGCCAACTTGTTGGGCTCTGGACTTCCAAATTACGAGGACCATGAATGGCTCAGGCATCGCAAGATCATCAACCCCGCTTTCCATATCGACAAATTGAAAGTTCTGACATCAACAATGGTGCAATGCTGCGATGATGTGATTAGTAAATGGGAGGAGATGGTGGTGTCTTCTTCTTCAGAGGGTAAATGCGACATTGATGTGTGGCCTTCCATCCAAAATTTGGCTTGTGATGTTATTTCTAGAACAGCCTTTGGAAGCAGTTACCAAGAGGGAAAAAGAATTTTTGAACTCCTTATGAAGCAAGCTAGACTTATAATGAAATTAAAATACATTCACATTCCAGGATGGTGGTTGCTTCCTACCAGTGTTAATAGGAGTATGATTAAAATTGATAGAGAGATACAAAAATCACTTGAAGCTATCATCAGCAAGCGAGAGGAAGCAATGAAGGATGGCGAGGAAGTTAACAAGAGTGACTTATTAGGCATACTTTTGGAATCAAACACCAATGAAATAAAAGAACAAGGATATGGAAACAGCAGCAGGAAGAAGGGCATTGGAATGAGTAATCGAGAGATAGTGGAAGAATGCAACACATTTTACCTTGCAGGGCAAGAAACCACGGCTGATTTGATGGTTTGGACAATGGTATTGCTAAGTAGGTATCCGGAATGGCAAACGCGTGCCAGGGAGGAAGTCTTCCAAGTCTTTGGTAACCGAAAACTAGACAATAATGGATTGAATCGCCTTAAAACCGTGACAATGATCTTGAATGAGGTGTTAAGGCTATACCCACCAGGCCTTTTTTTCACTAGAACAGTGGACAAAGATATAAAGATGGAAAACCTTTCACTACCTGCGGGAGTTAAGGTTACATTACCAATACTTTACATCCATCATGATCGGGAATTATGGGGTGATGATGCAAAGGAGTTCAAACCAGAAAGGTTTTCAGAAGGAATTGCAACAGCCACAAAGGGACGACTCTCATATTTTCCATTTGGATGGGGACCAAGAATATGCATTGGCCAAAACTTCTCCTTAATGGAAGCCAAGATATTTCTGACACTGCTTTTGCAACGCTTCACATTTGAGCTCTCCCCTGCATATACACATGCTCCAGTCAATTTCCTTACTCTTAAACCAATGCATGGGGCCCAAATCGTCTTACGTAAATTGTAG 1575 0.4229 MEEEFNFLGFGSVAAVLVLLFCGWKLLNSFFLTPKKLESLLRKQGYHGDPYTLFPNNSSSSSNNKSSLSDDKDIAPRVSCQGDHAINKFGYNSFYWEGHTLKVNITNPDHIKRVLTNNTFFKKEKLKLKRVANLLGSGLPNYEDHEWLRHRKIINPAFHIDKLKVLTSTMVQCCDDVISKWEEMVVSSSSEGKCDIDVWPSIQNLACDVISRTAFGSSYQEGKRIFELLMKQARLIMKLKYIHIPGWWLLPTSVNRSMIKIDREIQKSLEAIISKREEAMKDGEEVNKSDLLGILLESNTNEIKEQGYGNSSRKKGIGMSNREIVEECNTFYLAGQETTADLMVWTMVLLSRYPEWQTRAREEVFQVFGNRKLDNNGLNRLKTVTMILNEVLRLYPPGLFFTRTVDKDIKMENLSLPAGVKVTLPILYIHHDRELWGDDAKEFKPERFSEGIATATKGRLSYFPFGWGPRICIGQNFSLMEAKIFLTLLLQRFTFELSPAYTHAPVNFLTLKPMHGAQIVLRKL 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121193g00004 524 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00004 524 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00004 524 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00004 524 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00004 524 MobiDBLite consensus disorder prediction 53 69 - -
Stsc121193g00004 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Stsc121193g00004 524 MobiDBLite consensus disorder prediction 53 73 - -
Stsc121193g00004 524 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00004 524 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00004 524 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00004 524 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00004 524 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00004 524 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00004 524 SUPERFAMILY Cytochrome P450 86 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00004 524 Gene3D Cytochrome P450 83 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00004 524 Pfam Cytochrome P450 95 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00004 524 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121193g00004 Stsc-Chr121193 10703 12709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121193g00004 12 524 Cytochrome P450 AT3G14690 45.905 2.76e-163 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121193g00004 - K17873 gmx:100781923 603.208