Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121193g00001 ATGCTGCATATCATCACTTCATTCTTTCAACTGGAAGCCATGATTATAGTCTCCTTCTTCACCTTCACGCTCATCTTCTCCATCTTCTCCTTCCTCATCTACATATCAAGGATGAAACCATGGTGTAACTGCGATACTTGTCGCACCTACCTCAACATGTTATGGACCACACAATTCCCAAATCTCTGCGACTGGTACACCCACCTTCTCCGCACTTCACCCACCGGAACCATCCACCTCCACGTCCTCCAAAACACAATCACCTCCAACCCCGACAACGTTGAACACATCCTCAAGACCAAGTTCCACAACTACCCCAAAGGGAAACCCTTCTCTACTCTCCTCGGCGACCTTCTCGGCAACGGAATCTTCAACTCCGACGGCCATTCCTGGCGCTTCCAGCGAAAGATGGCCAGCCTTGAGCTCGGCAGCGTCGCCATTCGTTCTTACGCCCTTGATATCGTCAACCAAGAGATTCAAAGCAGGCTAATTCCTCTCCTGGAATCTGTTTCGGGCAAGCAAGATAGATCGTTGGACATGCAAGACATCTTAAGAAGATTCTCTTTCGACATCATATGCAAATTCTCCTTCGGAATGGACCCGGAGTGCCTGATTCCGTCCCTGCCGGAGTCCAAGCTGGCAGAGAGCTTCGACCTGGCATCCAAGCTGTCTGCAGAGAGAGCAATGTCGCCGTCGCCACTCATATGGAAGCTGAAGCGATTGTTGAACATCGGTTCTGAGAAGAAGCTGAGGGAGGCGATCGCAGTGGTGGACAATGTGGCCATGGACATGATAAGGAAGAGGAGGAGGGATATGAAGAAGACGATGGGTGTGGAGAAATCAGACTTGCTATCGCGATTCATGGGATCCACAGAAGACGACAAGTACCTGAGAGACATAGTCATAAGTTTCCTGCTGGCGGGTCGCGACACAATCGCAGCAGCGTTGACCGGATTTTTCATTCTGCTTTCCAAGAACCCGCATGTGGAGTCAACCATACGCCAAGAGCTGGACCGGGTCATGGAGCCCCATCAGGAATTGCCCACGTTCGATCAAATGAGGGCCATGCATTACCTCAATGGAGCACTTCACGAGAGCATGAGGCTGTTCCCTCCGGTTCAGTTTGACTCCAAGTACGCCGAAGAAGATGACGTCTTGCCAGATGGCACTCTTGTCACCCGAGGGAGTCGGGTCACCTACCACCCCTATGCAATGGGTCGGATGGATGCCATTTGGGGACCCGATTGGGCCGAGTTTCGTCCCCAAAGATGGTTGAATGAGGATGGTGTTTTTGTTCAGCACTGCCCCTTTAAGTACCCGGTTTTTCAAGCTGGGGTGAGGGTCTGTTTGGGAAAAGACTTGGCTTTGATGGAGATCAAGTCCATTGCCGCCGCCGTGCTCCGCCGCTTTGACGTCCGGGTTGTTGGGCCGAATATGGAGCCCCAATTTGTTCCGGGTCTTACTGCCACTGTGCGGGGTGGGTTGCCGGTTCAAATTAGCGATAGGAGCCTAGAAAGGTGA 1521 0.5207 MLHIITSFFQLEAMIIVSFFTFTLIFSIFSFLIYISRMKPWCNCDTCRTYLNMLWTTQFPNLCDWYTHLLRTSPTGTIHLHVLQNTITSNPDNVEHILKTKFHNYPKGKPFSTLLGDLLGNGIFNSDGHSWRFQRKMASLELGSVAIRSYALDIVNQEIQSRLIPLLESVSGKQDRSLDMQDILRRFSFDIICKFSFGMDPECLIPSLPESKLAESFDLASKLSAERAMSPSPLIWKLKRLLNIGSEKKLREAIAVVDNVAMDMIRKRRRDMKKTMGVEKSDLLSRFMGSTEDDKYLRDIVISFLLAGRDTIAAALTGFFILLSKNPHVESTIRQELDRVMEPHQELPTFDQMRAMHYLNGALHESMRLFPPVQFDSKYAEEDDVLPDGTLVTRGSRVTYHPYAMGRMDAIWGPDWAEFRPQRWLNEDGVFVQHCPFKYPVFQAGVRVCLGKDLALMEIKSIAAAVLRRFDVRVVGPNMEPQFVPGLTATVRGGLPVQISDRSLER 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121193g00001 506 PANTHER CYTOCHROME P450 32 497 - -
Stsc121193g00001 506 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00001 506 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00001 506 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00001 506 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00001 506 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00001 506 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00001 506 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00001 506 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00001 506 CDD CYP86A 74 495 - -
Stsc121193g00001 506 Pfam Cytochrome P450 73 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00001 506 SUPERFAMILY Cytochrome P450 54 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121193g00001 506 Gene3D Cytochrome P450 51 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121193g00001 Stsc-Chr121193 937 2594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121193g00001 32 503 Cytochrome P450 AT2G27690 60.669 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121193g00001 K20624 - gmx:100813091 717.613