Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121189g00001 ATGTCCATGGATCCAAAGAAATCAAACAAGATCAGAGAAATCGTTAGGCTTCAACAAATCCTCAAGAAATGGAGAAGGATAGCAAGCAACAACAATCACAACAACGAAGACAACAACAATAACAACGAGGGAAGTAATAATTTAAGAACCGCTGCGAACACCGGCACCACCGGTGGTAGCAGCAGTAGTACGAGCAAAAGCATTAAGTTTCTAAAGAGAACGCTTTCGCTATCGGAACGTGACGTGGCGCAGACGGCGAATAACAGCACTGTTGTTCCGAAAGGGTACTTAGCCATTTGTGTTGGTGAAGAGCTAAAACGGTTCATAATCCCAACGGTTTATTTGGGTCACCAAGCTTTTCAGATTCTTCTGAGAGAAGCAGAGGAAGAGTTTGGGTTCCAACAAACAGGTGTTCTTAGGATCCCTTGTGAAGTCTCAATTTTTGAGAGTATTCTGAAAATGGTTGAAGGGAAAAATAGTAGAAATAATAATAATAATAATAATAGTAATCAGAAGGAAAAGCTTTCTACTACTACTACTCAAGAATGCAGGCTTAGTGTTGAAGAGATTATGAGTTATTGTTCTTCTTCTTCCTCTGACAATCAACTTGCTTATTCTCACCATCCTCAGAGTCCTTTGTGCAGATAG 648 0.4012 MSMDPKKSNKIREIVRLQQILKKWRRIASNNNHNNEDNNNNNEGSNNLRTAANTGTTGGSSSSTSKSIKFLKRTLSLSERDVAQTANNSTVVPKGYLAICVGEELKRFIIPTVYLGHQAFQILLREAEEEFGFQQTGVLRIPCEVSIFESILKMVEGKNSRNNNNNNNSNQKEKLSTTTTQECRLSVEEIMSYCSSSSSDNQLAYSHHPQSPLCR 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121189g00001 215 MobiDBLite consensus disorder prediction 30 65 - -
Stsc121189g00001 215 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 76 151 IPR003676 GO:0009733
Stsc121189g00001 215 MobiDBLite consensus disorder prediction 158 179 - -
Stsc121189g00001 215 Pfam Auxin responsive protein 72 155 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121189g00001 Stsc-Chr121189 15124 15771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121189g00001 3 215 Calmodulin-binding Proteins AT4G31320 51.628 6.70e-60 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121189g00001 K14488 - tpra:123905602 229.95