Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121185g00001 ATGGGAAAGAAGGGGAGTTGGTTTTCTGCAATAAAGAGGGTTTTCACTCACCACTCCAAGGAGAAGCAGCAGGATTTAGAGAACAAAAGCTCGAAAGATAAGAAGAAGAAAGGCCTAGGAAAACTAAGGCATGGAGAGACCAATTCATTCATCCCTCTCTTCAGAGAGCCGAGCAGCATCGAGAAAATCTTTGGCGACTTTGAAAGAGAGCAACAACTACTATCTGTAAGGCCTTCGACACCTCTCGAGCAACCGAAGCAACCACCACCTCCGCCGCCACCTGTTGTCCCTCCTAGAGCTGCTTCTCCAAGGGCTCCTTCTCCGAGGGCTCCATCTCCAAGAGCTGCATCTCCGAAGGCTCCTTCTCCACGCGCAACCTCTCCCAAAGCTACTTCTTCCAGGATTGTTCATCACCACAAGGAGGTTGGCTATAGACCGGAACCAACTTTAAGGAATCAACATGCTGCGGCGACTAAGATCCAGGCTGTTTATAGAGGCTATATGGCCAGGAGGAGTTTTAGAGCTCTGAAGGGATTGGTGAGGCTTCAAGGCGTGGTAAGAGGACAGAACGTGAAGAGGCAGACGGTTAACGCCATGAAACACATGCAGCTTTTGGTGCGAGTTCAGTCTCAAATTCAATCTCGAAGGATTCAGATGCTAGAAAACCAGGCGCGATATCAAGCCGAGCTAAGGAATGACAAGGATGTTGCTAGCACCTTGGGCAAATTGACTTCTGAGAATGAAGATTGGGATGATAGCTTACTGACAAAAGAGGAAATTGAGGCAAGGCTACAGAGGAAGGTGGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATTTGCATACTCTCATCAGTCATGGAAATCCACTCCAAAATCATCTCAGACGCCGATGACAGACTTGCGATCCGGCGGATTCCCATGGTGGTGGAACTGGTTGGAGAGACAGGTGCCGGCCTCGGCCTCATCAAATCCACAAGAGAAACAATCCCTCAAGAACTTCCAAATCACACCTCCAAGACCATACTCAGAGCAGAAGACTAGTCCTAAACCCGCCTCAACCAGCACCCCCCGGCAGCAGCAGCAGCATTTCGCCTTCGATAACATGGACATACCGACACCGAAATCCACGAAATCAACCATACTCCCATCTTCAAGGCCTTCTAGAACTCCACCATACAGAACTCCACAACCACCAACCATGTCAAAGTATTCAAGAGCCTTCGACGTGCCTCTAAATGACGACGATAGCCTGACGAGTTGTCCACCATTTTCGGTGCCGAATTACATGGCTCCGACCGTGTCGGCTAAGGCCAAAGTGCGCGCAAATAGCAATCCAAGAGACAGGTTTGGTGGTGGTGGAACTCCAACAAGTGATTCAAAGAGGAGACTGTCATTCCCTTTCACACAAGGTATTGGTTCTTTCAAATGGAATAATAATAGTAATGGTAAAAACAATAAGGATCTTGCAGGATCTAATCACAGGATGCAACTTGATTCTTCTATAGGGAACATGAGTGTGGATTCAACTGTTTCTTTGCCTGCTACCATGGGGAGAAAGCCTTTTCAAAGATTTGTGTGA 1581 0.4788 MGKKGSWFSAIKRVFTHHSKEKQQDLENKSSKDKKKKGLGKLRHGETNSFIPLFREPSSIEKIFGDFEREQQLLSVRPSTPLEQPKQPPPPPPPVVPPRAASPRAPSPRAPSPRAASPKAPSPRATSPKATSSRIVHHHKEVGYRPEPTLRNQHAAATKIQAVYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAELRNDKDVASTLGKLTSENEDWDDSLLTKEEIEARLQRKVEAIIKRERAMAFAYSHQSWKSTPKSSQTPMTDLRSGGFPWWWNWLERQVPASASSNPQEKQSLKNFQITPPRPYSEQKTSPKPASTSTPRQQQQHFAFDNMDIPTPKSTKSTILPSSRPSRTPPYRTPQPPTMSKYSRAFDVPLNDDDSLTSCPPFSVPNYMAPTVSAKAKVRANSNPRDRFGGGGTPTSDSKRRLSFPFTQGIGSFKWNNNSNGKNNKDLAGSNHRMQLDSSIGNMSVDSTVSLPATMGRKPFQRFV 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121185g00001 526 Gene3D - 136 173 - -
Stsc121185g00001 526 MobiDBLite consensus disorder prediction 440 464 - -
Stsc121185g00001 526 Pfam IQ calmodulin-binding motif 154 174 IPR000048 GO:0005515
Stsc121185g00001 526 Pfam Protein of unknown function (DUF4005) 385 473 IPR025064 -
Stsc121185g00001 526 MobiDBLite consensus disorder prediction 320 388 - -
Stsc121185g00001 526 MobiDBLite consensus disorder prediction 82 118 - -
Stsc121185g00001 526 PANTHER IQ-DOMAIN 5-RELATED 1 469 - -
Stsc121185g00001 526 MobiDBLite consensus disorder prediction 320 402 - -
Stsc121185g00001 526 SMART iq_5 152 174 IPR000048 GO:0005515
Stsc121185g00001 526 MobiDBLite consensus disorder prediction 14 34 - -
Stsc121185g00001 526 MobiDBLite consensus disorder prediction 71 143 - -
Stsc121185g00001 526 MobiDBLite consensus disorder prediction 1 55 - -
Stsc121185g00001 526 ProSiteProfiles IQ motif profile. 153 181 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121185g00001 Stsc-Chr121185 11319 15956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121185g00001 1 525 IQD Protein Family AT3G59690 51.601 1.81e-157 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121185g00001 - - gmx:100807777 709.523