Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121180g00008 ATGCTCAACGAGATAAGCTCCCCATACGGCGACGCAAACCAAAAACTCGCTGCGTATTTCCTTCAAGCCTTGTTCAGCCGTGTAACCGCGGCCGGCGACCGAACCTACCGGACGTTAATGTCGGCTTCGGACAAGACTTGCTCTTTCGAGTCCACCAGGAAGACGGTTCTAAAGTTCCAGGAGGTTAGTCCCTGGACCACGTTTGGACACGTGGCGTCCAATGGCGCCATCTTGGAGGCTCTCGATGGAGAGCTCAACTTGCACATTGTGGATTTCAGCAACACGTATTGCACTCAGTGGCCAACGTTTCTAGAAGCCTTGGCCACTCGCAGCGACGACACCCCAAAACTCCGTTTAACCACCGTCGTCACCACTAGAGCCGGTGACTCTGGCGATGCGGTTCAGAGGGTCATGAAGGAAATAGGAATCAGAATGGAGAAATTTGCGAGGCTAATGGGAGTACCCTTCAAATTCCACGTCGTTCACCACGTCGGCGATCTCACCAACCTCAACATCGGCGATTTGGATATCAAGAACGACGAGGCTTTAGCCATCAACTGCGTGAACACGCTCCACGCGATCACACCCGTCGGCAACCACCGCGAAACGTTGATATCCTCGCTAGCAAAGTTAAACCCTCGGATCGTGACGGTGGTGGAAGAAGAAGCGGATTTGGACGTTGGCGTGGAAGGCCACGAGTTCCTTAAAGGGTTCGTAGAATGCGTGAGGTGGTTTAGGGTTTACATGGAAGCGCTCGATGAGAGCTTTCCGAGGACGAGTGGGGAGAGGCTGATGCTGGATAGGGCGGCGGGGAGAGCGATTGTGGACCTGTTGGCGTGTACGGCGGAGGATTCCGTGGAGCGGAGGGAGACGGCGGAGAAATGGTCGCACAGGATGAGGGAAGGTGGGGGGTTCAATACGATGCCGTTTAGCGAGGAGGTGTGTGATGACGTCAGGGCGCTGTTGAGAAGGTATAGGGAAGGATGGTCGATGGCACAGTGTTCCGATAACGGAATATTTCTTTGTTGGAAGGACCAGCCGGTGGTGTGGGCCAGTGAATGGAAGCCTTAG 1071 0.5472 MLNEISSPYGDANQKLAAYFLQALFSRVTAAGDRTYRTLMSASDKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALDGELNLHIVDFSNTYCTQWPTFLEALATRSDDTPKLRLTTVVTTRAGDSGDAVQRVMKEIGIRMEKFARLMGVPFKFHVVHHVGDLTNLNIGDLDIKNDEALAINCVNTLHAITPVGNHRETLISSLAKLNPRIVTVVEEEADLDVGVEGHEFLKGFVECVRWFRVYMEALDESFPRTSGERLMLDRAAGRAIVDLLACTAEDSVERRETAEKWSHRMREGGGFNTMPFSEEVCDDVRALLRRYREGWSMAQCSDNGIFLCWKDQPVVWASEWKP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121180g00008 356 ProSiteProfiles GRAS family profile. 1 355 IPR005202 -
Stsc121180g00008 356 Pfam GRAS domain family 2 355 IPR005202 -
Stsc121180g00008 356 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 348 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121180g00008 Stsc-Chr121180 41096 43114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121180g00008 2 356 GRAS Transcription Factor Family AT4G37650 68.320 1.24e-177 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc121180g00008 GRAS 3.8e-97 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121180g00008 - - gmx:100797072 570.081