Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121174g00001 ATGGATGCTCGTAGCTATTACTTCGATTCGGAATCTGCAAATGGCGCAGAATCGAGCGTGCATTTTTGCCGTGACGTGGATGAGGAGTATATTCCAAAGGCTGGAATTACTTTTCCATCACTTGAAGTAGCTGTTGATTTCTACAAAGAGTATGCTAAACGTGCTGGATTTTCTACTAAAATAAGGAACACCAATAGGTGTAGGAAAACCAAGGAAATAAAGAATCAACTCATCACATGTAACAGAGAGGGGAAATGGATATCCGAAATACCGTACGTTGAGAAGACGAATCCCACAGTGGTGCAAACTGCCCTGCATGAATTTATGTGTGTAAAACATGGTTACTATATGCATGCCAA 359 0.4095 MDARSYYFDSESANGAESSVHFCRDVDEEYIPKAGITFPSLEVAVDFYKEYAKRAGFSTKIRNTNRCRKTKEIKNQLITCNREGKWISEIPYVEKTNPTVVQTALHEFMCVKHGYYMHA 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121174g00001 119 Pfam FAR1 DNA-binding domain 46 89 IPR004330 -
Stsc121174g00001 119 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121174g00001 Stsc-Chr121174 77 1143 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc121174g00001 FAR1 2.7e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121174g00001 - - adu:110280446 95.9005