Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121173g00011 ATGGCATTGCCATTTGGATTAGAGACTCTGAACATCAAATGCAAGAGTGGGAAGGCCAAGATTCTTGGTACAATTGTGTGTGTAGGAGGGGCATTGTTGTTGACACTTTACAAAGGAAAGCCCTTGTTTGATGTTTCTCACTATGAGTCATCAGCAACCATGAGATCTGCAATGAAGCAACGCTCTTATCCACCTACTAGAACCATTGAGAAATGGAGTCTTGGTGTCATAGCTTTGATTCTGGGAACACTGTTTTGGTCATCATGGTTTATCTTGCAATCAAATATAGGGAAGATGTATCCATGCCGGTATTCTAGCACAGCCATCATGACCTTGTTTGGAGCCATTCAATCAGCTATCCTTGCCTTTTCCACTGGCAGAGACTTGTCCATGTGGATCCCCAATGGCAAGATTCAAATACTCACTGTTCTCTATTCTGGTATGGTTGGGTCAGGGTTGTGCTATGTGGGGATGTCATGGTGTGTTAAGAAGAGGGGTCCTGTGTTCACTGCAGCATTTAGCCCTCTCGTTCAGATAATGTCAGCCATGATTGATATCCCAGTCTTGCATGAGCAGCTCCATCTAGGAAGTGTTTTGGGATCATTGTTGGTTATGATGGGATTGTATATTCTTCTGTGGGGTAAGAGCAAGGATAATCAGAATCGTGTGACAAATTTGGTAGAAGAAGGTGGAAGCAAGGAACAAGGCCCGCCCCAAACAACACAACATGTTGCTATAACCTGCGATACACGCTCTAACTGA 762 0.4409 MALPFGLETLNIKCKSGKAKILGTIVCVGGALLLTLYKGKPLFDVSHYESSATMRSAMKQRSYPPTRTIEKWSLGVIALILGTLFWSSWFILQSNIGKMYPCRYSSTAIMTLFGAIQSAILAFSTGRDLSMWIPNGKIQILTVLYSGMVGSGLCYVGMSWCVKKRGPVFTAAFSPLVQIMSAMIDIPVLHEQLHLGSVLGSLLVMMGLYILLWGKSKDNQNRVTNLVEEGGSKEQGPPQTTQHVAITCDTRSN 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121173g00011 253 SUPERFAMILY Multidrug resistance efflux transporter EmrE 132 217 - -
Stsc121173g00011 253 PANTHER WAT1-RELATED PROTEIN 2 219 IPR030184 GO:0016020|GO:0022857
Stsc121173g00011 253 Pfam EamA-like transporter family 74 212 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121173g00011 Stsc-Chr121173 50012 51022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121173g00011 1 217 Nodulin-like Gene Family AT4G01440 42.466 1.09e-62 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121173g00011 - - qsa:O6P43_012803 348.591