Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121172g00005 ATGCACATGGCTCATGTGGATGACGTGGCAAGAGCTCATATATTCCTTCTTGAACATCCTAATCCAAAAGGCAGATATAACTGCTCTCCATTCATTATATCTATTCAACAAATTTCTCAACTTCTTTCTGCCAAGTATCCACAATTTCAAGTACCAACTGTAGATGAGCTGAAGGATATTAAAGGACCCAAGCAACCACAATTGATCTCAAAGAAGCTCATAGATGCTGGGTTTGTGTTCAAGTATAGCTTGGAGGAAATGTTTGAAGATGCAATTGAATGCTGCAAGGAGAAGGGTTATCTTTGA 306 0.3889 MHMAHVDDVARAHIFLLEHPNPKGRYNCSPFIISIQQISQLLSAKYPQFQVPTVDELKDIKGPKQPQLISKKLIDAGFVFKYSLEEMFEDAIECCKEKGYL 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121172g00005 101 Gene3D - 1 101 - -
Stsc121172g00005 101 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 99 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121172g00005 Stsc-Chr121172 21828 22273 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121172g00005 3 101 Monolignol Biosynthesis Gene Families AT2G02400 31.731 7.54e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121172g00005 - K13265 gmx:100793687 176.792