Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121169g00007 ATGCCCATTAGTCCAAGAACTCCACAACCAGGAAGCCCATGGCTACAGCGCGGTGGCGGTTACCTTTCACCAACTACCATTTCCAACAACACCTCCATTGAGCCTTCTCCTTCTTCTTCTTCCGGTGGATCTTCCATTATTAACGATAATGTGAATGAGCTTGTTGTGAATTCGAAGTCGGCGATTGCTGACGTGGAGGTTAAGTTTTCCGGGAAGTATGTTGTGCTGAAAACTGTGTCTTCAAGAATTCCTGGGCAAGCAATGAGGATAGTATCAGCACTTGAAGACCTTGCTCTTGAGATCCTTCATGTTAGTATTAGCACTGCCGATGAAACCATGCTAAACTCTTTCACTATTAAGGCATTGTCTTCGGTTGCTGAAAGGCAACAAAAACTTATTAAAAGCACTGGCTATTCTTGA 420 0.4405 MPISPRTPQPGSPWLQRGGGYLSPTTISNNTSIEPSPSSSSGGSSIINDNVNELVVNSKSAIADVEVKFSGKYVVLKTVSSRIPGQAMRIVSALEDLALEILHVSISTADETMLNSFTIKALSSVAERQQKLIKSTGYS 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121169g00007 139 MobiDBLite consensus disorder prediction 1 45 - -
Stsc121169g00007 139 PANTHER TRANSCRIPTION FACTOR FAMA 2 122 IPR044283 GO:0003700|GO:0010052
Stsc121169g00007 139 MobiDBLite consensus disorder prediction 19 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121169g00007 Stsc-Chr121169 43314 45415 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121169g00007 2 120 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G53210 51.079 1.66e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121169g00007 K20558 - rcu:8274388 146.747