Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121167g00003 ATGGCTGCTTCAATCCCTCATCCTCAGTTCTTTTCAAACTACAACACCTTCGTTACCGATCTTGCAGATTTTCCTAATTATCATGCACCCAACAATAATGACAACAACGTTTCATCAATCATTATGGACAATTTTGCTATATGGGGTAGTAGCCAAGATTGCTTCTTTGTTAACAACAACAACAGCGGCAGCAGCAACAACGCTGTGGTTATTGATAACGAAACACTTGATTGTGACGCCATGAATAATTCTGGTTCTTGGGTAGTGCCAAGTTTTGGAGAGCAACTCGGCGTTGGCGGTGTGTCGTCGGATATGGCTGTGCCGGCCATATCTGACTGTAAAATGGGGTTCTACAGTGGCGCCACGGCAGGGTTTCAAGACTTTAGCAGCGGCTACCGGCCTCGTCTTGGCGATTTTGGAGAAGAATGTTGTGGTTTTGCGGAGGATATTAAGCCGCCTACCTATCCTAACGCCGCAAGAGAGAATTGGCAGGGGATTCAAGGAAATCAAATGGCAGCAATTGAAGAACCTAACATAAAGGTAGGAAGGTACTCAGAGGAAGAAAGAAAGGAAAGGATTCTCCGATACTTGAAGAAAAGAAATCAAAGAAACTTTAACAAAACCATCAAGTATGCATGCCGGAAAACGTTAGCGGATAGGCGTGTTCGAGTTAGGGGAAGGTTTGCAAGGAACAATGAAATGTTATGTGAGGAAGACATGGCTACAAAGAAGAGTGAGAATCATCATCATGATTTGAAAGAAGAGTTTTATGGTGGTGAATCAATACAGTTCCAGTTAAAGAATGATGAGGAGGACTGGTTGCAAGAAGCCATGGCAAGTTTGGTCTATTTATCTCACTCTTCACCAGAAGACATGTAG 879 0.4334 MAASIPHPQFFSNYNTFVTDLADFPNYHAPNNNDNNVSSIIMDNFAIWGSSQDCFFVNNNNSGSSNNAVVIDNETLDCDAMNNSGSWVVPSFGEQLGVGGVSSDMAVPAISDCKMGFYSGATAGFQDFSSGYRPRLGDFGEECCGFAEDIKPPTYPNAARENWQGIQGNQMAAIEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNEMLCEEDMATKKSENHHHDLKEEFYGGESIQFQLKNDEEDWLQEAMASLVYLSHSSPEDM 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121167g00003 292 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 114 245 IPR045281 GO:0009909
Stsc121167g00003 292 ProSiteProfiles CCT domain profile. 189 231 IPR010402 GO:0005515
Stsc121167g00003 292 Pfam CCT motif 189 231 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121167g00003 Stsc-Chr121167 27990 30211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121167g00003 155 230 C2C2-CO-like Transcription Factor Family AT3G02380 36.842 5.56e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc121167g00003 CCT 9.3e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121167g00003 - - gmx:102660475 354.755