Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121166g00004 ATGGCACAATTGCCGCCAAAGATTCCCAACATGGCAACTAATTGGCCTGAGTTTTCATCCGATCATCACCACCACCACGATGACCACCACCAAAAGATGCCTTCTCTCACAAGCATTTCAACAAACACAAACCGGCACCAACACCCGCAACAACAGCAAAACCCTTCGTGGGTTGACGAGTTCCTGGACTTCTCGTCGGCGAGGCGCGGGGCCCACCGACGGTCCATGAGCGACTCCATCTTCGTGGAGTCGCCCAGGCACATTAACCACGGTAGCAGCAACGGCGGCATAGGCGGAGGCGGAGGAGTGGAAGCAGACGAGTTTGATAGATTCGATGATTATCAATTCATGAACATGTTCAGTGATGAGGTAGTTTCCGGTGGCGATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAACAACAATAACAATTCCATGAATATGATGACTATGATGATGGTGCCGCCGCCGACGCTGTCAACTTCATCAAATCCTTCTAGTCCTTCGGATCATGATAGCATCAACGATAATGAGAGAGAAGCAATCAACAAAGAGATCAATAATAAGAATCTTCATCAACTTGAGCATCAACAAGTGAAGGTGGAATCTGATGAAGATGAAAGCCAATGCAATAATAATAAAGCTCATCAGGATGAGGATGATGATAGCGGTAAGAATAACAATAACACCAATGCAAATGCAAATGCTGCTACAACTACTTCAAGCGATAAAATTACAGACCCCAAGAGGGTAAAAAGGATTTTGGCTAATAGACAATCAGCACAAAGATCAAGGGTGAGGAAGCTGCAATACATATCAGAGCTTGAGCGTAGTGTAACATCATTACAGGCGGAAGTTTCAGTATTATCACCACGGGTGGCATTTTTGGATCACCAACGTTTGCTTCTAAATGTTGACAACAGTGCTCTCAAGCAAAGAATCGCAGCTTTGGCACAGGACAAGATCTTCAAAGATGCTCATCAAGAAGCACTGAAGAGGGAGATAGAGAGACTAAGGCAAGTGTATCACCAACTGAACGTGAAGAAGACTATGGAAATTGCTTCAGCCACAGTGTCACCTTCAATATCTCCATCATCTTCAGCAAGACCACGTTGTGATACTCAGAATAATGAAAAGGAACAGCTTATCAATGTTTGA 1185 0.4253 MAQLPPKIPNMATNWPEFSSDHHHHHDDHHQKMPSLTSISTNTNRHQHPQQQQNPSWVDEFLDFSSARRGAHRRSMSDSIFVESPRHINHGSSNGGIGGGGGVEADEFDRFDDYQFMNMFSDEVVSGGDNNNNNNNNNNNNNNNNNNNNNNNNSMNMMTMMMVPPPTLSTSSNPSSPSDHDSINDNEREAINKEINNKNLHQLEHQQVKVESDEDESQCNNNKAHQDEDDDSGKNNNNTNANANAATTTSSDKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQLNVKKTMEIASATVSPSISPSSSARPRCDTQNNEKEQLINV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121166g00004 394 MobiDBLite consensus disorder prediction 85 106 - -
Stsc121166g00004 394 MobiDBLite consensus disorder prediction 207 234 - -
Stsc121166g00004 394 MobiDBLite consensus disorder prediction 123 184 - -
Stsc121166g00004 394 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 261 276 IPR004827 GO:0003700|GO:0006355
Stsc121166g00004 394 Gene3D - 257 330 - -
Stsc121166g00004 394 MobiDBLite consensus disorder prediction 34 55 - -
Stsc121166g00004 394 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 256 308 IPR004827 GO:0003700|GO:0006355
Stsc121166g00004 394 MobiDBLite consensus disorder prediction 207 259 - -
Stsc121166g00004 394 MobiDBLite consensus disorder prediction 235 253 - -
Stsc121166g00004 394 FunFam Basic leucine zipper 61 257 330 - -
Stsc121166g00004 394 PANTHER BASIC LEUCINE ZIPPER 34 1 384 - -
Stsc121166g00004 394 SMART brlzneu 254 318 IPR004827 GO:0003700|GO:0006355
Stsc121166g00004 394 MobiDBLite consensus disorder prediction 1 55 - -
Stsc121166g00004 394 SUPERFAMILY Leucine zipper domain 258 312 IPR046347 GO:0003700|GO:0006355
Stsc121166g00004 394 Coils Coil 337 357 - -
Stsc121166g00004 394 CDD bZIP_plant_RF2 259 309 IPR044759 GO:0003700|GO:0006355
Stsc121166g00004 394 MobiDBLite consensus disorder prediction 367 394 - -
Stsc121166g00004 394 Pfam bZIP transcription factor 258 302 IPR004827 GO:0003700|GO:0006355
Stsc121166g00004 394 MobiDBLite consensus disorder prediction 124 180 - -
Stsc121166g00004 394 MobiDBLite consensus disorder prediction 18 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121166g00004 Stsc-Chr121166 41236 44415 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121166g00004 1 335 bZIP Transcription Factor Family AT3G58120 49.432 3.62e-87 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc121166g00004 bZIP_1 4.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121166g00004 - - ahf:112737744 479.174