Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121166g00003 ATGGAATCGCATTTCTTCCTCCTCCGTTGTTTTCTCCTCTTCGCTTCTGCCGCATCTTCTCTTTCCCACCCTTCTCTCCTCGGTGTTCATCCTCAAGATGAGAAATATTACAGCTCTGAGATAATCAAGTGCAAGGATGGATCAAAATCCTTCTCCAAAGATCGTCTCAATGACAATTTCTGCGATTGTCCTGATGGAACTGATGAACCAGGAACTTCAGCTTGTTCGGCCGGAAAGTTTTATTGCAGAAACCTGGGAAGCAAGCCACAATTCATATTCTCTTCTCATGTTAATGATCTTTTCTGTGATTGTTGTGATGGGAGTGATGAATATGATGGACACATCCGGTGCCCCAACACTTGTGTAATGGGTGGGAATGCCGAAATTGGCAATTACAATTCAAAAGAGAGTCAGCAGACTTCTTTTGCTGGAAAAGTGACCAAAGATGGAGTGAAGTTGGAGGATTCTGTTCACAATCTTATCAGTTTGAGGTTGGCAATTATTCTACAAGTGGTTCTGGTTGCTTTTATGGTATTTCTATGGCGTTTTGGTTGCCGTACCAGATCTAAAAGGAAGCGTACCATTGAACTGAAAGAGATCTAG 603 0.4245 MESHFFLLRCFLLFASAASSLSHPSLLGVHPQDEKYYSSEIIKCKDGSKSFSKDRLNDNFCDCPDGTDEPGTSACSAGKFYCRNLGSKPQFIFSSHVNDLFCDCCDGSDEYDGHIRCPNTCVMGGNAEIGNYNSKESQQTSFAGKVTKDGVKLEDSVHNLISLRLAIILQVVLVAFMVFLWRFGCRTRSKRKRTIELKEI 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121166g00003 200 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 5 145 IPR039794 -
Stsc121166g00003 200 Pfam Glucosidase II beta subunit-like 15 136 IPR028146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121166g00003 Stsc-Chr121166 23994 27135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121166g00003 17 135 Calmodulin-binding Proteins AT5G56360 64.167 3.98e-47 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121166g00003 - - tpra:123907740 280.411