Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121163g00002 ATGGCTTCTTCTGCAAACAACAACAATACCACCATCAAAATCCACGACAAAGGTCTCGTTCCTCCTCCTAATTCTTCTTCTCCCCGACAATTTTCTCTCCCACTCACTTTCTTCGACCTCGCCTGGCTAAGGTTCCACCCTGTTGAACGCATCTTCTTCTATTCCCTTCCCACTCCACACTCATCCCTCCATTCTCTCCTTCACCAAGTGGTTCCAAATCTCAAGAACTCTCTCTCGCTTACCCTCCACCACTTCCTTCCTCTTGCTGGAAACCTTGTTTGGCCTTCTGATTCTAACAAACCACTAATTCAATACAACCTTGGTGACGGTGTTTCACTCACTATAGCAGAGTCTACTCAAGACTTGAACCATTTCTTGGTGAATTCGCCCGTTGAAGCTTTGGATTCTCGCTCTTTGGTGCCCCACTTGGAATCATCGGATTCTCATGCGTCTGTTATCTCTCTTCAGATCACACTATTTCCAAACAGTGGCTTCAGTATTGGGATCAGTTCCCACCATGCTGTTCTCGATGGAAAATCTTCAACCATGTTCGTTAAGGCTTGGGCTTATCTATCTCGTGAATGTCAATTATCCAACGAAGAATCAACAAGTTTGGCTCCTGAATTGGTTCCAATCTTTGACAAGGAAGCCATCAAGGACCCAAATGGACGCGATATCATGTTCATAAACATGTGGAACCAAATATCGTCCCTGCTTGATCCCAACAGCGATAGCAGCAACGGAAGAACCCTTAAGATCATGTCAAGTGCGTTTCCGCCATTGGTGGATGACAGGGTTAGAGCAACGTTTGAGTTAACACGTGGAGATTTGGATAAGATAAGGAACAGGGTGTTGTCCAATTGGGACATGGTGGATGATGATGATGTTGAAGATGTTAATATTATCTCTTCTTCTGCAAAGCAACCACCACCAAAGTTGTCGACTTTTGTTGTCACATGTGCCTATGTCTCTGTGTGCATTGCAAAAGCAACAGAGGAAGAATCCAAACAAAAGGGTAACAGTAGTAACAATGAAAATAAATTCGCGTTTGGATTCACTGTGGATTGCAGGGCTAAAATGGAGCCTCCGGTTCACGAGAACTACTTTGGGAACTGCGTATCCGGGCATATGGTTGATGCTGCAAAGCCAGAAGACTTCACAAAAGAAAACGCCTTGGTGATTGTAGCGAAAAAGATTTACAGAAAGGTGAGTTCGCTTGGTAGCATGGAAGGAGCGCTTGATGGAATAGAGACACTGTTCTTTAGAGGGATGACGATGATGAAAGAAGGGGTGAAAGGAATAGGAGTTGCGGGATCAGCGAGGTTTGGCGTTTATGAAATGGATTTTGGGTGGGGGAAGCCGGAAAAGGTTGAGATAACGTCGGTGGACAGAGGAATCACCATTGGGATGGCAGAGAGCAGGGACGGGAGTGGTGGGATTCAAGTGGGGCTTGTACTCAATAAACACGTGATGTCTCTGTTTAGTGATTTATTTCATGCGGGTCTGTGCTGA 1512 0.453 MASSANNNNTTIKIHDKGLVPPPNSSSPRQFSLPLTFFDLAWLRFHPVERIFFYSLPTPHSSLHSLLHQVVPNLKNSLSLTLHHFLPLAGNLVWPSDSNKPLIQYNLGDGVSLTIAESTQDLNHFLVNSPVEALDSRSLVPHLESSDSHASVISLQITLFPNSGFSIGISSHHAVLDGKSSTMFVKAWAYLSRECQLSNEESTSLAPELVPIFDKEAIKDPNGRDIMFINMWNQISSLLDPNSDSSNGRTLKIMSSAFPPLVDDRVRATFELTRGDLDKIRNRVLSNWDMVDDDDVEDVNIISSSAKQPPPKLSTFVVTCAYVSVCIAKATEEESKQKGNSSNNENKFAFGFTVDCRAKMEPPVHENYFGNCVSGHMVDAAKPEDFTKENALVIVAKKIYRKVSSLGSMEGALDGIETLFFRGMTMMKEGVKGIGVAGSARFGVYEMDFGWGKPEKVEITSVDRGITIGMAESRDGSGGIQVGLVLNKHVMSLFSDLFHAGLC 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121163g00002 503 PANTHER - 12 502 - -
Stsc121163g00002 503 Gene3D - 262 503 IPR023213 -
Stsc121163g00002 503 Pfam Transferase family 16 496 - -
Stsc121163g00002 503 MobiDBLite consensus disorder prediction 1 25 - -
Stsc121163g00002 503 Gene3D - 7 252 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121163g00002 Stsc-Chr121163 28505 30016 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121163g00002 39 494 Monolignol Biosynthesis Gene Families AT5G48930 23.454 3.41e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121163g00002 - - gmx:100813762 553.132