Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121163g00001 ATGATTGACGACAATGATGGCAAGCAAGAAAAAGAAAAGGAAGCATTTGCTCTCACAACAGCATCAGAGCTCTTAATTAAAGGAACTGATCACCCTTGTATATCTCCAGTTGTTGAGTTGGTTACTGATTCAACTATTTCAGTTTGGTTCCATCATCTAAACAAGTGGTTTTACGACGAAAACCGCCCTCTATCCGAAATCACCTTGGGGAAACCCTTCTGGGAGTTTCTTGTTAAGAACCCTACACACATGAGCTTGTTCAATGAAGCTATGGCCAGTGATTCTCAGATGATGAAGTTGGCACTAAAGGATCACAACATGGCCTTTCAGGGCTTGGAATCAATTGTGGATGTTGGGGGTGGAACTGGAACCACAGCTCAAATTATCAGTGAAAATTTCCCAAAACTCAAATTTATAGTATTTGATCTTCCACATATTGTGAAAGGTCTGAAGGCAAGCAACAATTTGAGCTTTGTTGGTGGAGACATGTTTGAATCCATTCCTAAGGCTCATCCAGTTCTTCTTAGTACGCATTTATTTTCCCTTCATTTCTCAAGAATAATAATGGCAATGGAAACCGCTATGAATCCAACTGTTTCAATTAAATTAGTAATGCCTCTGATTCTCCTGCACCAGAACTTGAAAATTCAACGGGTCAACGAGGGTCAAATTGCACCTAAAGATGCTTCTGTTCCACCCAGTAGTCTTATTAGTGAGAGCAGGTACCTATTGAAAATGAAGACATCAATTGCTGAGTCAAAAGGGAATGATTTTGTTCCAGATGATACTGTTAAGGTGGCAGAGCCTAACATTCCAAAGGGCCAAATAGTTGAGACAGTAGAATCTGTTGCACTTCCTGAAACAAAACCAGCCACTGTTGCATATTGA 888 0.402 MIDDNDGKQEKEKEAFALTTASELLIKGTDHPCISPVVELVTDSTISVWFHHLNKWFYDENRPLSEITLGKPFWEFLVKNPTHMSLFNEAMASDSQMMKLALKDHNMAFQGLESIVDVGGGTGTTAQIISENFPKLKFIVFDLPHIVKGLKASNNLSFVGGDMFESIPKAHPVLLSTHLFSLHFSRIIMAMETAMNPTVSIKLVMPLILLHQNLKIQRVNEGQIAPKDASVPPSSLISESRYLLKMKTSIAESKGNDFVPDDTVKVAEPNIPKGQIVETVESVALPETKPATVAY 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121163g00001 295 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 31 176 IPR029063 -
Stsc121163g00001 295 PANTHER O-METHYLTRANSFERASE 14 172 IPR016461 GO:0008168
Stsc121163g00001 295 Pfam O-methyltransferase domain 50 180 IPR001077 GO:0008171
Stsc121163g00001 295 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 281 IPR016461 GO:0008168
Stsc121163g00001 295 Gene3D Vaccinia Virus protein VP39 29 217 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121163g00001 Stsc-Chr121163 8130 10846 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121163g00001 16 175 Monolignol Biosynthesis Gene Families AT5G54160 30.000 3.35e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121163g00001 K22588 - ahf:112740688 249.21