Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121161g00003 ATGGCCTCCCCAACCGCCACCAATTCCCTTCATGTGGAATCCGGCTCCCCACCGCAGCCAAGCCCAATCTGGAAGCTGTTCCTGGTAGCCTCCATCGCTGCTGGAATCCAATTTAGCTGGGCTCTGCAGCTCTCACTCCTAACACCCTACAGTCAACTTCTCGGAGTACCACACATATGGTCCTCTTTCATCTGGCTCTGCGGCCCCATCTCCGGCATGGTTGTCCAACCCATAGTCGGTTATTACAGAGATAGATGCACATCCAAACTGGGCCGCCGCCATCCTTGCATCCTCGGCTGTGCCGTCGTCGTCGCCGTAGCAGTCTTCCTCATTGGGTTCGCCGCCGACATCGGCCACGCCTTTGGAGACGACCTCTCCAAGAAAACACGGCTGCGCGCCATGGCCATCTTCGTGATCGGGTTCTGGGTGTTGGACGTGGTGCACAACGTGCTCTTTGGCCCATGCCGAGCGTTCCTGGGTGACCTGGCCGCCGGCGACGAACAGAAAACTCGACTGGCAAACGCGTTCTTCTCATTCTTCATGGCAGTGGGTAGCGTGCTGGGTTACGACGCGGGTTCCCTTGACGGAATCCACAAAGTGTTCCCATTCTCACAAACAAAAGCGTGTGACAAATTCTGCGCAAACCTGAAAACGTGCTTCATCTTCGCGATCCTGCTTCTGCTGTTCTTGACGGCCTTGGCTCTTTTATACGTCAAGGACAAGCAATTTACACGTGAGAAGTCAGGCGAGGGAGAGGAGGATGAGAGATCGGCAACAGTGGCATGCTTCGGGGATATGTTAGCGGCACTCAAGGGGCTGAAGAAGCCCATGTGGTTGCTGTTGGCGGTTACGGCAATAAACTGGTCAGCGTGGTTCTCATACTTCTTGTTCATCACCGATTGGATGGGGAAGGAGGTGTACGGTGGGAAGGTTGGGGATGAGGCGTACAGTAATGGTGTGGAGAAGGGATCTTTGGGTCTTTTGATCAACGCCGTGGTTTTGGGTGCTATGTCTCTGGCTGTGGAACCCCTTGGGCGTGCGGTTGGTGGCGCCAAGAACCTTTGGGGATTTGTTAACTTTATCCTCTCCGCTGGCTTGGCCATGACCGTTTACATTTCCAAGGTAGCTAAGCACGACCGCCATATTAACCCCCACTACATTGGTCATCCCTCCACCGGCGTCCAGGCCGGAGCCTTGAGCTTCTTCGCCGTTCTCGGCATTCCACTTGCGGTAATTATCAAGCCTCACGCCAAACGTGGACATGAGTGGCTACAACAACAGAGGCACCACGTTATACGTGGGTTCCTCACGTTGTACGCCAGCCCCCACAGATTCAAATTTGAATCTCAACCCCTATTCAGTAAGAAAAGAAAGGGAAAAGCAGTGGCAGAATCAAGCAATGAGGCACCAAGGTTCAAAACTCCCTTCCATGAAGCACATTTCAAAGGGAAGCTTTCCGCAAGAAAGGTGCTACCTGAATTAGCCATTGATTACAATGATGAAATCCTCTCACCATGTGCAATGCAAATCAAGGCAAGAAAGTGA 1545 0.532 MASPTATNSLHVESGSPPQPSPIWKLFLVASIAAGIQFSWALQLSLLTPYSQLLGVPHIWSSFIWLCGPISGMVVQPIVGYYRDRCTSKLGRRHPCILGCAVVVAVAVFLIGFAADIGHAFGDDLSKKTRLRAMAIFVIGFWVLDVVHNVLFGPCRAFLGDLAAGDEQKTRLANAFFSFFMAVGSVLGYDAGSLDGIHKVFPFSQTKACDKFCANLKTCFIFAILLLLFLTALALLYVKDKQFTREKSGEGEEDERSATVACFGDMLAALKGLKKPMWLLLAVTAINWSAWFSYFLFITDWMGKEVYGGKVGDEAYSNGVEKGSLGLLINAVVLGAMSLAVEPLGRAVGGAKNLWGFVNFILSAGLAMTVYISKVAKHDRHINPHYIGHPSTGVQAGALSFFAVLGIPLAVIIKPHAKRGHEWLQQQRHHVIRGFLTLYASPHRFKFESQPLFSKKRKGKAVAESSNEAPRFKTPFHEAHFKGKLSARKVLPELAIDYNDEILSPCAMQIKARK 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121161g00003 514 SUPERFAMILY MFS general substrate transporter 24 371 IPR036259 -
Stsc121161g00003 514 Gene3D MFS general substrate transporter like domains 23 246 IPR036259 -
Stsc121161g00003 514 Pfam MFS/sugar transport protein 31 290 - -
Stsc121161g00003 514 NCBIfam sucrose/proton symporter 22 412 IPR005989 GO:0005886|GO:0008515|GO:0015770
Stsc121161g00003 514 PANTHER SUGAR TRANSPORTER 22 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121161g00003 Stsc-Chr121161 46170 48331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121161g00003 8 411 Sucrose Transporter Gene Family AT1G71880 59.951 5.27e-174 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121161g00003 K15378 - gmx:100784153 553.132