Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc121159g00004 | ATGTTCTACGACGAGTTCCCTCCTCTCCCTGATTTCCCATGCATGTCTTCATCGTCTTCTTCGTCTTCAACTCCAGCACTTCCATTGAAGAATCTAACATGCTCAACCACCTCCGCCACAACGACCACCGCAACAACCTCTTCCTCTTCATCTTCTGCATCTTCCTGGGCTGTTCTGAAGCCAGAAGCCGAGGAGAATAACAATAATAATGATGATGCAGAGTGGAATTACTGCAATAAACAAGATATTTACATGCATCATCATGATCCACTTGAGGCTACAACTCCGGCAGGAGGAGCGTTGTCCTCAACTGCCTCCATGGAGGTTTCACAGCCACAACAGTTTCCGGATCAAGCCGGGTTCGACGGTGGTGGTGGTGGTGATTGCATGGATGATGTGATGGACACTTTTGGGTACATGGAGCTTCTAGAATCCAACGAGTTCTTCGACCCTTCGTCTATCTTCGAAGGCGAAGAGAATCCCTTCACACAAGAGGTTCAGGTTCTTCCGAATCAAGAAGAAGAACAACAGCAGCACCAGCAAGAAAAACATGCAATATTTGAAAACCAAAACGATCTTGCTTTTCTTGGGCAGCAGCAAGAAGCAGAGGAAGGTGTTAGTAATAATTATCAACAGTTTCTTGGTAACGATGCAGAGATCCAAGGAGGCGGTGGAGGTGGTGCAATGGCGGATGATGAAATGAGCATGGTATTCTTGGAGTGGCTGAAGTCGAACAAAGACAGCGTTTCCGCCAGCGATTTGAGGAATGTGAAGCTGAAGAAATCGACGATAGAGAGTGCAGCGAAGCGATTGGGTGGTGGAAAAGAAGCTATGAAGCAATTGCTGAAGCTGATTCTTGAATGGGTTCAAACCAGCCACCTTCAGAATAAGAGGCGCAAGGAAAATAATAATAATAATGACAATGATGGAGTCGCCAACACTTTCACTGAACCGTTTCAAGATCCGACTCATCAAAACCAGAACAACGCAATAAATGCTTCGGGTTCTTTTGAGACTGAACCAAACACATGTTTCATGCACCAACCATGGATGGCAGATCAAACACCTCTAATAGCGTCAGCTGCTCCTCCGCCGCCTCCCCAATCTCAGCCTCAGCCTCAGTTTCAACAACCCATGGTTGGTTATGTTGGCGACCCTTACACAAATGGTGCTGTTGCAAACACCATCCATGGCAGCAATTTTCAGCATGGTAATGAATATCATATGCTGGAAACAGCGAACTCATGGCCTCCTTCTCAGTTCACTGTTGCTCCTCACTATGCACAGCCATTTGGGGATCATAATATGAATAGCTTTCAGCCTCCGCCGGTGGCCGCGGCGTTTGGTGGCTTTGGTAATCAGTATCCTTATCAGTTTTTCCATGGCCCTGGTGGTGATGGATTGATGAGATTAGGACCCTCGGCTACAAAAGAAGCGAGGAAGAAGCGGATGGCGAGGCAGAGAAGGCTTTCTTCTCATCATCCTAGGCATCAAATTAACTTACAGAGTCAGGGTTCTGATCCAAATGCAAGGTTGGGTGTTGGTGAAAATTGTACTGGTGGTGTTGTGTCTGCTGCTGCGGCGGCGGCGCATCATGGGAATCCGGCGGCTAATTGGGTGTATTGGCCAACTATGGGTGGTGGTGTAGCTTCCATTGCACCAGTGGCTCCGGCAGAGGCTGTGCGGGTGGATAAACCGGCCATGCAGACACAGAATTATCATCATCAGGGTAGACTCTCATCTGATAGGAGACAGGGTTGGAAGCCTGAGAAGAACTTAAGGTTCCTTTTACAAAAGGTGTTGAAGCAAAGCGATGTTGGAAGTCTGGGGAGAATTGTTCTACCAAAAAAAGAGGCAGAAACACATTTACCAGAACTAGAGGCAAGAGATGGAATCACTATAACAATGGAAGACATTGGCACCTCTCGTGTTTGGAACATGCGCTATAGATACTGGCCAAACAACAAAAGCAGGATGTATTTGCTAGAGAACACAGGTGACTTTGTTAGAGCCAATGGACTCCAAGAGGGAGATTTCATAGTGATATATTCAGATGTGAAGTGTGGAAAATATATGATAAGAGGAGTTAAAGTAAGGCAACAACCAGGGGCGAAACCAGCAGAGAGCAAGAAAACAGGAAAATCTCAGAAAAACCAGCATGTTAACAATGCGGCACCTCCTACAAATGCCACGCCATCTTCCACTCACCGCAAAAAATGA | 2220 | 0.4667 | MFYDEFPPLPDFPCMSSSSSSSSTPALPLKNLTCSTTSATTTTATTSSSSSSASSWAVLKPEAEENNNNNDDAEWNYCNKQDIYMHHHDPLEATTPAGGALSSTASMEVSQPQQFPDQAGFDGGGGGDCMDDVMDTFGYMELLESNEFFDPSSIFEGEENPFTQEVQVLPNQEEEQQQHQQEKHAIFENQNDLAFLGQQQEAEEGVSNNYQQFLGNDAEIQGGGGGGAMADDEMSMVFLEWLKSNKDSVSASDLRNVKLKKSTIESAAKRLGGGKEAMKQLLKLILEWVQTSHLQNKRRKENNNNNDNDGVANTFTEPFQDPTHQNQNNAINASGSFETEPNTCFMHQPWMADQTPLIASAAPPPPPQSQPQPQFQQPMVGYVGDPYTNGAVANTIHGSNFQHGNEYHMLETANSWPPSQFTVAPHYAQPFGDHNMNSFQPPPVAAAFGGFGNQYPYQFFHGPGGDGLMRLGPSATKEARKKRMARQRRLSSHHPRHQINLQSQGSDPNARLGVGENCTGGVVSAAAAAAHHGNPAANWVYWPTMGGGVASIAPVAPAEAVRVDKPAMQTQNYHHQGRLSSDRRQGWKPEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGITITMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQQPGAKPAESKKTGKSQKNQHVNNAAPPTNATPSSTHRKK | 739 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc121159g00004 | 739 | MobiDBLite | consensus disorder prediction | 496 | 510 | - | - | |
Stsc121159g00004 | 739 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 236 | 715 | IPR044800 | GO:0003700 | |
Stsc121159g00004 | 739 | ProSiteProfiles | B3 DNA-binding domain profile. | 597 | 699 | IPR003340 | GO:0003677 | |
Stsc121159g00004 | 739 | MobiDBLite | consensus disorder prediction | 487 | 510 | - | - | |
Stsc121159g00004 | 739 | Gene3D | - | 593 | 712 | IPR015300 | - | |
Stsc121159g00004 | 739 | FunFam | B3 domain-containing transcription factor FUS3 | 593 | 708 | - | - | |
Stsc121159g00004 | 739 | Pfam | B3 DNA binding domain | 598 | 694 | IPR003340 | GO:0003677 | |
Stsc121159g00004 | 739 | SUPERFAMILY | DNA-binding pseudobarrel domain | 596 | 692 | IPR015300 | - | |
Stsc121159g00004 | 739 | MobiDBLite | consensus disorder prediction | 716 | 733 | - | - | |
Stsc121159g00004 | 739 | CDD | BfiI_C_EcoRII_N_B3 | 595 | 696 | - | - | |
Stsc121159g00004 | 739 | MobiDBLite | consensus disorder prediction | 37 | 71 | - | - | |
Stsc121159g00004 | 739 | SMART | B3_2 | 597 | 699 | IPR003340 | GO:0003677 | |
Stsc121159g00004 | 739 | MobiDBLite | consensus disorder prediction | 699 | 739 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc121159g00004 | Stsc-Chr121159 | 15972 | 21089 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc121159g00004 | 1 | 734 | B3 DNA Binding Superfamily | AT3G24650 | 43.766 | 4.87e-158 | 473 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Stsc121159g00004 | B3 | 1.3e-18 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc121159g00004 | K09287 | - | gmx:100810343 | 764.222 |