Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121156g00002 ATGGATCTTGAAGGTGGAACTCATCGAAACTCAAAGATAGAGTCATGGAAGACGGTTCTGACTTTAGCATATCAGAGCCTGGGTGTTGTTTATGGTGATTTGAGCACTTCACCTTTATATGTATTTAGAAGCACTTTCTCTGATGAAGTTGGTGATGCTGTGTCAGTGGATAAGATCTATGGTGTGTTATCTTTGGTGTTCTGGACCTTCACTTTGGTTCCTTTGGTGAAATACGTGTTCATAGTACTTAAGGCTGATGATAATGGCGAAGGTGGGACCTTTGCGCTTTACTCATTGCTGTGCCGCCATGCCAGGGTGAGTTCACTGCCAAATGTGCAGCTTGCAGATGAGGAACTCACTGAGTATAAGAAAGATGGTTATGGTGTGGCACCAGAGAGCAGCTTTGCATCAAGGCTTAAGTCAACTTTGGAGAAGCATAAGGTGCTTCAGAGGATTCTTCTTGTTCTTGCTTTGATTGGAACTTGCATGGTCATTGGTGATGGGGTCCTCACACCTGCTCTTTCTGTTTTCTCAGCTGTGTCAGGATTTGAGCTTTCAATGTCCAGGGAGCATCATAGATATGTAGAAGTTCCAGCTGCATGCATCATATTGATAGGCTTGTTTGCCCTTCAACACTACGGCACACACAGGGTTGGCTTCTTATTTGCTCCTATCGTGATCATGTGGCTTTTCTGCATCAGTACCATTGGTATATATAATATATTCCACTGGAACCCTCATGTATACAAAGCACTGTCTCCGAATTACGCATTCCAGTTTTTGAGGAACTCTCAGAAAGGAGGTTGGATGGCCCTTGGTGGAATTTTGCTATGCATAACAGGATCAGAAGCGATGTTTGCCGATCTTGGACACTTCTCACAGTTATCAATCAAGATTGCCTTCACCTCCATAGTTTATCCATCATTGATCCTTGCATATATGGGACAAGCTGCTTATTTATCTAGGAATCATGAAGTTCGGCAACAGTATCACTTCGGATTTTATGTATCTGTACCAGAGAAATTAAGATGGCCTGTTCTGGCGATAGCCATCCTTGCCGCTGTTGTGGGAAGCCAAGCCATCATCACTGGAACTTTCTCGATTATCAAACAATGCTCCGCCTTAAGCTGCTTCCCTCGAGTCAAAGTGGTTCACACATCATCTAAAATTCATGGCCAGATATATATCCCCGAGATCAATTGGCTGCTGATGCTCTTGTGTTTGGCCGTGACGATCGGTTTCAGAGACACAAAGCGTTTGGGTAATGCTTCAGGTTTGGCGGTTATTACGGTGATGCTGGTTACCACATGTTTGATGTCCCTGGTTATAGTTCTGTGCTGGCACCAGAATGTTCTACTTGCGCTTGGATTTGTTTTCGTATTTGGCACCATCGAGGCTCTCTTCTTCTCGGCTTCTCTGGTCAAGTTCCTAGAAGGAGCATGGGTACCTATTGCATTGGCATTTGTATTTATGACTGTCATGTATGTTTGGCACTACGGCACGCTCAAGAAGTATGAATTCGACGTGCAAAACAAGGTTTCCATCAACTGGCTAGTGGGTCTAGGTCCCAGCATAGGCATCGTACGAGTGCGCGGGGTTGGCCTTATACATACCGAGCTAGTGTCCGGAATCCCTGCAATCTTCTCGCACTTTGTAACCAACCTGCCGGCTTTTCACCAGGTAGTTGTTTTCCTCTGCATCAAGCATGTCCCAGTTCCTCACGTTAGACCGGAGGAACGGTTTCTAGTTGGTCGCGTAGGTCCAAGAGATTTCCGGCTCTACCGATGCATAGTGCGATATGGATACCGTGACGTCCACAAAGACGACATGGAGTTTGAGAACGATCTCATATGCAGCTTAGCCGAGTTTATAAAGACCGGAAGCACCACACCTAACTCCACAAACGAGGAAACTGAAAGCGACGATAAAATGTCAGTTGTCGGAACATGCTCCGGCCATACGATGATGATGAAAGAGGACAACTCGGATAACCCCGTCGATAACAATGCAGATGACTTGGCCGGGACATCAGAGCTAAAGGAGATTAAGTCGCCCGTGATCCAGCCGAAGAGGAAAAGGGTGAGGTTTTTCGTCCCGGAGAGCCCTAAGATGGATAGGGGAATAATGGATGAGTTGGAGGAGATAATGGAAGCAAGGGAAGCTGGGGTAGCATACATTATAGGGCAATCACACATGAGGGCGAAAGCAGGGTCAAGCGTGATGAAGAAATTTGGTATTAATGTTGTGTATGAATTCCTAAGGAGGAATAGTAGGTCATCATCACTTGTGCTTAGTGTGCCACATCAATCTTCTTTAGAAGTAGGGATGATGTACCAAATTTAA 2343 0.4545 MDLEGGTHRNSKIESWKTVLTLAYQSLGVVYGDLSTSPLYVFRSTFSDEVGDAVSVDKIYGVLSLVFWTFTLVPLVKYVFIVLKADDNGEGGTFALYSLLCRHARVSSLPNVQLADEELTEYKKDGYGVAPESSFASRLKSTLEKHKVLQRILLVLALIGTCMVIGDGVLTPALSVFSAVSGFELSMSREHHRYVEVPAACIILIGLFALQHYGTHRVGFLFAPIVIMWLFCISTIGIYNIFHWNPHVYKALSPNYAFQFLRNSQKGGWMALGGILLCITGSEAMFADLGHFSQLSIKIAFTSIVYPSLILAYMGQAAYLSRNHEVRQQYHFGFYVSVPEKLRWPVLAIAILAAVVGSQAIITGTFSIIKQCSALSCFPRVKVVHTSSKIHGQIYIPEINWLLMLLCLAVTIGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHQNVLLALGFVFVFGTIEALFFSASLVKFLEGAWVPIALAFVFMTVMYVWHYGTLKKYEFDVQNKVSINWLVGLGPSIGIVRVRGVGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKHVPVPHVRPEERFLVGRVGPRDFRLYRCIVRYGYRDVHKDDMEFENDLICSLAEFIKTGSTTPNSTNEETESDDKMSVVGTCSGHTMMMKEDNSDNPVDNNADDLAGTSELKEIKSPVIQPKRKRVRFFVPESPKMDRGIMDELEEIMEAREAGVAYIIGQSHMRAKAGSSVMKKFGINVVYEFLRRNSRSSSLVLSVPHQSSLEVGMMYQI 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121156g00002 780 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 11 779 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc121156g00002 780 Pfam K+ potassium transporter 24 604 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc121156g00002 780 NCBIfam potassium uptake protein 22 780 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121156g00002 Stsc-Chr121156 34968 39683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121156g00002 1 780 Inorganic Solute Cotransporters AT1G70300 72.357 0.0 1182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121156g00002 K03549 - gmx:100793141 1273.07