Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121155g00001 ATGTCATCCGAGGACGGAATGCCTAAGCAGGAAACTCAAGGGTTTTCCAGCAGCAGCATTCCACCCAAGCTAGACGTCTACATTTGGGACATGGATGAGACCCTTATACTGCTCAACTCCTTGCTGAAATCATCATATGCTGAGGGTTTCAATGGTCTCAAGGATGCACAGAAAGGCGTGGAAATTGGGAAGATGTGGGAGAATCTCATTCTACAATTGTGTGATGACTATTTCTTCTATGAACAAATAGAAAATCTAAATTACCATACACCATTTCTTGATGCTCTGGCCCAGTATGATGATGGGAGGGACCTATCTAATTATGATTTTAACCAAGACGACTTGGGTCCTCCGCGTGATGATGGCAACAAAAGAAAACTTGCCTATAGACATCGAGTCATAGCACAAAAGTACTTACAGGGTTTGCATAATATTTTAGATCATGAGATGCTGAAACTCTGGGATGAATTGTATGATAAAACTGATGAATATACTGACAGATGGCTGTCTTCAGCACGGAGCTTTTTGAAGGAGTGTTCAGGAGAAAACAAAGATTTGGTTTCTTCCATCGCTTTAGTATCTAACACAACCAATGCAAAGCATCAGCACGTAAATGTTTTAGTGACATCAGGAGGGTTAATACCCTCTCTTGTCAAATGCTTGCTCTTTCGTCTCGACAGCTTAATAACACATGGAAATGTTTATAGCTCTTGCGTAGTGGGGAAAACTCAATGTTTCCAATGGATCAAGGAGCGTTTCAAACATCCGAATGTCCGGTTTTGTGTAATTGGAGATGGATGGGAAGAGTGTCAAGCTGCAGAAATCATGAGGTGGCCATTTATTAGGATTGACCCGCGGCCAGACAAACTTCATAGGTTCCCTGGTCTCTCATTGACAACAGTTGGCCACTATTTCGCAGTGGTATATGGAAGCCCAAATGATGAGAATGGTGAAGAATAA 960 0.4198 MSSEDGMPKQETQGFSSSSIPPKLDVYIWDMDETLILLNSLLKSSYAEGFNGLKDAQKGVEIGKMWENLILQLCDDYFFYEQIENLNYHTPFLDALAQYDDGRDLSNYDFNQDDLGPPRDDGNKRKLAYRHRVIAQKYLQGLHNILDHEMLKLWDELYDKTDEYTDRWLSSARSFLKECSGENKDLVSSIALVSNTTNAKHQHVNVLVTSGGLIPSLVKCLLFRLDSLITHGNVYSSCVVGKTQCFQWIKERFKHPNVRFCVIGDGWEECQAAEIMRWPFIRIDPRPDKLHRFPGLSLTTVGHYFAVVYGSPNDENGEE 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121155g00001 319 NCBIfam EYA conserved domain 25 301 IPR006545 GO:0007275
Stsc121155g00001 319 SFLD Haloacid Dehalogenase 24 285 - -
Stsc121155g00001 319 SUPERFAMILY HAD-like 28 285 IPR036412 -
Stsc121155g00001 319 FunFam Eyes absent homolog 25 293 - -
Stsc121155g00001 319 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 24 285 - -
Stsc121155g00001 319 Gene3D - 25 294 IPR038102 -
Stsc121155g00001 319 PANTHER EYES ABSENT 18 305 IPR028472 GO:0004725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121155g00001 Stsc-Chr121155 545 4381 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121155g00001 24 319 Protein tyrosine phosphatase (PTP) family AT2G35320 60.738 1.59e-134 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121155g00001 - - gmx:100791661 533.102