Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121150g00005 ATGACATCAAAGGGTTTATTGCAAAGTGAGGAGTTGTATAAGTATATTTTGGAATCTAGCGTCTACCCGCGTGAGCCAGAGCCTCTCAAGGAGTTAAGGGTTGCAACTGCTAACCATCCAAGGAAATTCATGGCTACGGCACCAGATGCAGGTCAGATCATTACCATGCTTCTTCAACTAGTAAATGCTAAGAAGACTATTGAGATCGGAGTCTTCACCGGATACTCGCTTCTACTCACAGCGCTTTCGATTCCTGAGGACGGCAAGATAACTGCTATCGATATGGATCGAGATGCATATGAAATTGGATTACCAATAATTAAGAAAGCTGGTGTTGAGCACAAGATTAACTTTGTCGAGTCTGCGGCTTTGCCGGTTCTAGATCAGCTCTTGACTGATCATGAGAATGAAGGGAGTTTTGAATATGCATTTGTTGATGCCGACAAAGTTAACTATTGGAACTACCATGAGAGGCTAATGAAGTTGTTGAAGGTTGGTGGGATAGTGGTCTATGATAACACCCTCTGGGGAGGCTCCGTTGGAATGAATCAAGACGAGACACCGGAATTCTTCAGACCTGGCAGGCATCTAACAATCGAATTCAACAAACGAATTGCAGCTGATTCTCGTGTCCAGATTTCACTTGCTCCATTTGGGGATGGCATCACCATATGCAAGCGTATCATCTGA 690 0.4406 MTSKGLLQSEELYKYILESSVYPREPEPLKELRVATANHPRKFMATAPDAGQIITMLLQLVNAKKTIEIGVFTGYSLLLTALSIPEDGKITAIDMDRDAYEIGLPIIKKAGVEHKINFVESAALPVLDQLLTDHENEGSFEYAFVDADKVNYWNYHERLMKLLKVGGIVVYDNTLWGGSVGMNQDETPEFFRPGRHLTIEFNKRIAADSRVQISLAPFGDGITICKRII 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121150g00005 229 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 9 227 IPR029063 -
Stsc121150g00005 229 PANTHER O-METHYLTRANSFERASE-RELATED 2 228 - -
Stsc121150g00005 229 Gene3D Vaccinia Virus protein VP39 1 229 IPR029063 -
Stsc121150g00005 229 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 5 228 IPR002935 GO:0008171
Stsc121150g00005 229 Pfam O-methyltransferase 18 228 IPR002935 GO:0008171
Stsc121150g00005 229 CDD AdoMet_MTases 67 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121150g00005 Stsc-Chr121150 39303 42503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121150g00005 3 228 Monolignol Biosynthesis Gene Families AT4G26220 70.796 3.01e-121 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121150g00005 K00588 - rcu:8265096 359.762