Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121149g00001 ATGCATGTCTTTGAATATGCAAAGATTGATCCTAGGTTCAACGAGGTTTTCAATAAGTCTATGGTGAACTCCTCCACTATATTAATGAAGAGGACTCTTGATCTCTACAAAGGATTTGAGCACGTTAATAAACTAGTGGATGTTGGTGGTGGTTTTGGAAACAATCTTAAATTGATCACTTCTAAGTACCCTCATATTCATGGCATCAACTTTGATTTGCCTCATGTCATAGAACATGCTCCCACCTATACTGGTGTGGAGCACGTGGCAGGAGATATGTTTGAGAGTGTTCCTAATGGAGATGCTATTTTCATAAAGAGAGTACTTCATGATTGGAGTGATGAAGAATGCTTGAAGATATTGAAGAATTGCCACAAGGCTATACCCAATGATGGGAAGGTGATTGTGATGGACATGATCATTCCCATTGTGCCTGAGCCAATAGCTATTGTCAAAGACTCTTTTAGAGCTGATGTTGTCATGATGGCTCAGACGCCAGGAGGGTTTGAAAGAAGCAAACAAGATTTCATGGACTTAGCAAATGGATCTGGATTTAATGGCATAAGGTTTGTTTGTTGTGTCTCTAGCTTTTGGATCATGGAGTTCTACAAGGCTACTACTTAA 624 0.3958 MHVFEYAKIDPRFNEVFNKSMVNSSTILMKRTLDLYKGFEHVNKLVDVGGGFGNNLKLITSKYPHIHGINFDLPHVIEHAPTYTGVEHVAGDMFESVPNGDAIFIKRVLHDWSDEECLKILKNCHKAIPNDGKVIVMDMIIPIVPEPIAIVKDSFRADVVMMAQTPGGFERSKQDFMDLANGSGFNGIRFVCCVSSFWIMEFYKATT 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121149g00001 207 Gene3D Vaccinia Virus protein VP39 14 194 IPR029063 -
Stsc121149g00001 207 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 204 IPR016461 GO:0008168
Stsc121149g00001 207 Pfam O-methyltransferase domain 2 186 IPR001077 GO:0008171
Stsc121149g00001 207 Gene3D - 2 32 IPR036388 -
Stsc121149g00001 207 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 203 IPR029063 -
Stsc121149g00001 207 PANTHER O-METHYLTRANSFERASE 3 202 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121149g00001 Stsc-Chr121149 1318 3187 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121149g00001 1 204 Monolignol Biosynthesis Gene Families AT5G54160 54.902 4.89e-80 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121149g00001 K13066 - gmx:100789402 307.375