Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121148g00007 ATGGATCTTGAATTTGGGAATTGTTGGAGCAACTCAAAGAAGGATTCTTGGAAGACTATTCTGCTCTTAGCATACCAAAGCCTTGGTGTAGTGTATGGGGATTTGAGTATTTCTCCTTTGTATGTTTACACGAGCACATTTGCAGAAGATATTGAGCATTCTGAGACCAATGAAGAGATTTTTGGTACTCTTTCCTTTGTGTTCTGGACTCTCACATTGGTGCCACTCTTCAAATACGTTTTTGTTGTTCTTAGAGCTGATGACAATGGAGAGGGTGGTACATTTGCTCTATATTCATTGATTTGTAGGCATGCTAAGGTCAGTCTTCTCCCGAATCGGCAACACTCCGATGAAGCGCTTTCGACGTATAAGATGGAGGAGCCTCCTGCTAAGATGAACTCTATGGTGAAGATGCTGCTTGAGAAGTATAAGGCCTTGCATACAGCTCTGCTAATTGTGGTTCTTCTTGGGACTTGTATGGTTATTGGTGATGGACTTCTTACCCCTGCAATTTCAGTTTTCTCAGCAGTATCTGGTCTTGAAGTATCTATGTCCAAGAAACATCACCAGTATGCTGTGATTCCAATCACTTGCTTCATACTCTTGTGTTTGTTTGCGCTTCAACACTATGGCACGCATCGAGTTGGATTCCTTTTTGCCCCAATTGTGCTGGCATGGCTGCTATGCATCAGCACACTTGGTTTATACAACATATTCAAATGGAATCCACACATATATAAAGCGCTTTCGCCGTATTACATGTTCAAGTTCTTGAAGAAGACTAGGATAAGTGGATGGATGTCTTTAGGTGGAATACTACTTTGCATAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGCCATTTCTCATATATGGCTATTCAGATTGCGTTCACATTTCTGGTGTATCCTGCACTTATATTGGCATATATGGGTCAAGCTGCATACTTGTCCAACCACCATCATCTCCAAATCAGTTTCTATGCCTCAGTTCCAGAAAGCGTGAGGTGGCCGGTGATTATCTTAGCAATTCTAGCTTCTGTTGTGGGAAGCCAGGCGATCATAAGCGGGACATTTTCGATAATAAACCAGAGCCAATCTCTGGGTTGCTTCCCAAGGGTTAAAGTTGTTCATACTTCAGACAAGATCCATGGTCAAGTCTACATCCCTGAGATCAATTGGATACTCATGATCCTCTGTATAGCTGTGACCATTGGATTTAGGGACACAAAACACATGGGAAATGCATCAGGATTAGCAGTGATGACAGTTATGCTTGTAACAACATGCCTTACATCTTTAGTGATCATACTCTGCTGGCACAAACCCCCAATTGTAGCACTTTGTTTCTTGTTGTTTTTCGGATCCATTGAGCTGCTGTATTTCTCAGCTTCACTGATGAAGTTCTGTGAAGGAGCATGGTTCCCTATTCTCCTAGCCCTATTCCTAATGATCATAATGTTAATATGGCACTATGCAAGCATCAAGAAATATGAATATGATCTCCACAACAAGGTTTCACTTGATTGGCTTNNNNNNNNNNGTCCAAGCCTTGGAATTGCTCGAGTCCCCGGAATAGGCCTAGTTTTCACTGACCTTACCACAGGCATACCGGCTAACTTCTCGCGATTCGTCACCAACCTCCCGGCTTACCACCGGATACTTGTGTTTGTGTGTGTGAAGTCAGTGCCAGTCCCTCATGTCCCCGTGGCAGAGAGGTACCTTGTCGGCCGCGTCGGCCCTCCTCAGCACAGGTCCTACAGGTGCATAGTCCGGTATGGATACCGTGATGTCCATCAAGACATAGATTCCTTCGAATCAGAGCTTGTAGAGAAGCTATCTGATTTTATTCAGTATGACTGGTTCCGAGCCAGCAGAGCGAGCAACGCGAGCAATAACGAAGATGACGGTTCGTGCTCGAATGAATCTTCAGGATACAGGCTAACTGTCATAGGAACCATGGGACTCAGCGATGAGAGCGTGCAGCTGGCGAGTGTGAGTGACGTGGTTGAGATTGATGCACCTTTGGGAATGAGAGAAAGAAGGGTGAGGTTTGCCATTGAAGATGAGAATGATAATGATAATGATAATGATAATGAGAGTGTGATGGTTCATAATCAGATGCAAGAAGAGCTTGATGATCTTTTTGCAGGTCAAGAATCTGGGATAGCGTTCATTCTTGGACACTCTCATGTTAGAGCGAAGCCCGGGTCATCGATATTCAAGAAGCTTGCTTTGAATTATGGATACAATTTTCTTAGAAGGAATTGTAGAGGCCCTGACGTGGCTCTTAAGGTTCCACCTGTTTCCCTTTTGGAAGTTGGCATGGTTTACGTTCTGTAG 2343 0.437 MDLEFGNCWSNSKKDSWKTILLLAYQSLGVVYGDLSISPLYVYTSTFAEDIEHSETNEEIFGTLSFVFWTLTLVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQHSDEALSTYKMEEPPAKMNSMVKMLLEKYKALHTALLIVVLLGTCMVIGDGLLTPAISVFSAVSGLEVSMSKKHHQYAVIPITCFILLCLFALQHYGTHRVGFLFAPIVLAWLLCISTLGLYNIFKWNPHIYKALSPYYMFKFLKKTRISGWMSLGGILLCITGSEAMFADLGHFSYMAIQIAFTFLVYPALILAYMGQAAYLSNHHHLQISFYASVPESVRWPVIILAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQVYIPEINWILMILCIAVTIGFRDTKHMGNASGLAVMTVMLVTTCLTSLVIILCWHKPPIVALCFLLFFGSIELLYFSASLMKFCEGAWFPILLALFLMIIMLIWHYASIKKYEYDLHNKVSLDWLXXXXPSLGIARVPGIGLVFTDLTTGIPANFSRFVTNLPAYHRILVFVCVKSVPVPHVPVAERYLVGRVGPPQHRSYRCIVRYGYRDVHQDIDSFESELVEKLSDFIQYDWFRASRASNASNNEDDGSCSNESSGYRLTVIGTMGLSDESVQLASVSDVVEIDAPLGMRERRVRFAIEDENDNDNDNDNESVMVHNQMQEELDDLFAGQESGIAFILGHSHVRAKPGSSIFKKLALNYGYNFLRRNCRGPDVALKVPPVSLLEVGMVYVL 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121148g00007 780 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 12 778 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc121148g00007 780 Pfam K+ potassium transporter 25 597 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc121148g00007 780 NCBIfam potassium uptake protein 23 778 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121148g00007 Stsc-Chr121148 39530 42923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121148g00007 1 780 Inorganic Solute Cotransporters AT2G40540 75.659 0.0 1223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121148g00007 K03549 - gmx:100806122 1330.47