Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121147g00004 ATGGCTTGCATGTGGCTCAAGCAAGCTTGCAGTGGTGGAAGCTGCGGGAAGAAGCTTCCAGCCGACGTGCCACGAGGTCACCTAGCTGTAACCGTTGGGGAAGCGAACCGGAGGTTCGTGATAAGGGCAGATTATTTGAACCATCCAATACTACAACAATTGCTAGACCAATATGAAGGGAATGGATTCAACAAGAGTGGTCCTCTATCTATACCTTGTGATGAGCTACTCTTTGAGGACATAATTCAGTCCCTCGGAGGCCCCGGTGCAGCAGCCGAATCACGTAGAACCTCTTGCCCCCATGTGCCATTGAAGGACTCTACACCACTACTTCAAAGCTTTGATAGCAAAAGGAGTAGGAGCTAA 366 0.4973 MACMWLKQACSGGSCGKKLPADVPRGHLAVTVGEANRRFVIRADYLNHPILQQLLDQYEGNGFNKSGPLSIPCDELLFEDIIQSLGGPGAAAESRRTSCPHVPLKDSTPLLQSFDSKRSRS 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121147g00004 121 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 16 80 IPR003676 GO:0009733
Stsc121147g00004 121 MobiDBLite consensus disorder prediction 87 121 - -
Stsc121147g00004 121 Pfam Auxin responsive protein 14 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121147g00004 Stsc-Chr121147 5398 5964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121147g00004 1 117 Calmodulin-binding Proteins AT4G34750 43.609 4.14e-25 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121147g00004 K14488 - gmx:100777611 154.066