Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121146g00007 ATGGAGAGAGTCGCGGAGCCAAAGGTGCTTCCTAGAACCATGCCTGTGTTGGTAGAGGTTTCTAATGCACACAAGGGGACAATAATAAGTGAAGCTAGTCAGAGACTAAATGGGAACGAGTTTTCGAGTTTGCGTGGGATTTCGAAAGCAAGGGACAACCCTGTGACACGTTTGGCATCCATCAGAGAAGTTGCTCAATTATCAAATGCAAGAGTTGTTTTGGTAAGAGATGACATGGGATTCGATACTCGGTCGCTTCAAGAACCAATCTCTCCTGCACCTACAAGAACATTGAAAGGAAAAGTCTCTTTGCCAGAACCAGAAGAACTTAAGGCATCTTCTCTGGAAACTGCTCCGAATTCATTCGCCGGGGCTAGTCACCCCCCGGAACCAGTTGATACTGATCTTACGAGAACTGTTTATGTGCCAATTGGTCAGAGCAAATCCGAGGCTGCAAGCTTAACTAAAAACATGTCCTTGCAGGGTCCTTTCCTAGAAGATCTAACAATTTGTGTTCCTGCCAAGAAACCAAGCCTGAGTGTTCATTCTCCTGCAGAAAGCATGGTTGAAGAATCAAACGGTACAGAGAACTTGTCCTCACCTCAGAATACCGAGAGCTCTATCCCTCCCCCGGATTCTGAGGAGAAAGAGTGTGTTTGGGATTCTTCTTTGCCTCCAACTCCGAGTGGTAATGTTAGTCCACATAGTAGTATTGATAGTTCTAGTGTTGTAAGAGCAATGAGCATCGCGAATAGTTGCACAAGTACTTACCGGAGTGATGCATTCACAAGCGATGGCATGATTAGTTTAGACAGGAATTGTGATAGTACTAAGGGAAGTGTGAGTGTAAGAGGAGAATCCCTTGAGAGTGCGAAAAGCAGCCCGAGTCGAGTGAGTGATAGCAGTGGCCTAAGTGATGACAGCAGTTGGAGTAACATCACTGGTGGTGCCAATAAGCCTCACAAAGGAAATGATCCGAGGTGGAACGCTATACTTGCTATCCGAGCTCGCGATGGAGTCTTGGGAATGAGTCATTTTAGGTTGCTGAAAAGGCTTGGTTGTGGGGATATTGGAAGTGTATATCTCTCAGAGCTGAGCGCGACTCGGTGCTATTTCGCGATGAAGGTTATGGACAAGGCATCATTAGAGAGCAGAAAGAAGCTGAACAGGGCACAAACAGAAAGGGAGATACTGCAGCTGCTGGACCATCCATTCCTACCAACTTTATATACACATTTCGAGACCGATAGATTCTCGTGTTTGGTAATGGAATACTGTCCGGGGGGAGATCTACACACTTTAAGACAACGCCAACCGGGGAAACATTTCTCGGAGTATGCTGCACGATTTTATGCTGCTGAGGTTCTCTTGGCACTTGAGTATCTTCACATGCTTGGAGTAGTGTACCGCGACCTTAAACCAGAGAACGTGCTGGTCCGCGACGATGGCCACATTATGCTCTCAGACTTTGATCTTTCTCTTAGATGTGCTGTTTCCCCTACGCTTATCAGAACTTCTCATGATGGCGACCCTTCAAAACGGGCCGGTGGTGGCGCATTCTGTGTCCAGCCAGCTTGTATTGAGCCTACCTCAGTATGCATCCAACCTTCTTGTTTCATGCCTCGCCTCTTCCCACAGAAAAGCAAGAAATCAAGGAAGCCTAGACCCGATCCGGGGATTCCTGCCAACACACTTCCGGAGCTTGTTGCCGAGCCTACTCAAGCTCGGTCCATGTCCTTCGTAGGCACCCACGAATACCTCGCCCCCGAAATCATCAAAGGAGAAGGCCATGGAAGTGCAGTTGACTGGTGGACATTTGGAATTTTCTTGCATGAGCTGTTATATGGCAAGACACCTTTCAAAGGCTCAGGAAACCGTGCTACATTGTTCAATGTGGTAGGTCAGCAGCTCAAGTTCCCCGAATCGCCGGCCACTAGCTATGCAAGCCGGGATCTTATCCGTGGCTTGCTGGTTAAGGAACCACAGCACCGGCTCGGGGTGAAGAGGGGTGCTACCGAGATCAAGCAGCACCCTTTCTTTGAAGGTGTGAATTGGGCGTTGATCAGGTGTAGCACACCGCCGGAAGTGCCAAGACCGGTCGAAGCCGAGCTACCGGCAACAAAGTTTGAAGCAGTTAATACAGTTGGGGTTGGCAACAATAGTAAGAGGATGGTAAGTAATAACAGTAGTAATAGTAATAGTAATAGTAATAGTAATAATAATAAGAATAATAATGAGATGAAATCTGGGGGTAAATATCTTGATTTTGAGTTCTTTTAG 2280 0.4711 MERVAEPKVLPRTMPVLVEVSNAHKGTIISEASQRLNGNEFSSLRGISKARDNPVTRLASIREVAQLSNARVVLVRDDMGFDTRSLQEPISPAPTRTLKGKVSLPEPEELKASSLETAPNSFAGASHPPEPVDTDLTRTVYVPIGQSKSEAASLTKNMSLQGPFLEDLTICVPAKKPSLSVHSPAESMVEESNGTENLSSPQNTESSIPPPDSEEKECVWDSSLPPTPSGNVSPHSSIDSSSVVRAMSIANSCTSTYRSDAFTSDGMISLDRNCDSTKGSVSVRGESLESAKSSPSRVSDSSGLSDDSSWSNITGGANKPHKGNDPRWNAILAIRARDGVLGMSHFRLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLESRKKLNRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSHDGDPSKRAGGGAFCVQPACIEPTSVCIQPSCFMPRLFPQKSKKSRKPRPDPGIPANTLPELVAEPTQARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVEAELPATKFEAVNTVGVGNNSKRMVSNNSSNSNSNSNSNNNKNNNEMKSGGKYLDFEFF 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121146g00007 759 FunFam serine/threonine-protein kinase D6PK-like 430 497 - -
Stsc121146g00007 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Stsc121146g00007 759 Gene3D Transferase(Phosphotransferase) domain 1 575 699 - -
Stsc121146g00007 759 Pfam Protein kinase domain 577 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121146g00007 759 Pfam Protein kinase domain 347 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121146g00007 759 FunFam serine/threonine-protein kinase D6PK-like 575 698 - -
Stsc121146g00007 759 FunFam Serine/threonine-protein kinase D6PK-like 344 429 - -
Stsc121146g00007 759 MobiDBLite consensus disorder prediction 546 567 - -
Stsc121146g00007 759 MobiDBLite consensus disorder prediction 273 318 - -
Stsc121146g00007 759 Gene3D Transferase(Phosphotransferase) domain 1 426 494 - -
Stsc121146g00007 759 Gene3D Phosphorylase Kinase; domain 1 700 710 - -
Stsc121146g00007 759 Gene3D Phosphorylase Kinase; domain 1 344 425 - -
Stsc121146g00007 759 CDD STKc_phototropin_like 344 703 - -
Stsc121146g00007 759 MobiDBLite consensus disorder prediction 715 749 - -
Stsc121146g00007 759 MobiDBLite consensus disorder prediction 185 209 - -
Stsc121146g00007 759 ProSiteProfiles Protein kinase domain profile. 346 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121146g00007 759 PANTHER FLIPPASE KINASE 1-RELATED 145 720 - -
Stsc121146g00007 759 MobiDBLite consensus disorder prediction 179 238 - -
Stsc121146g00007 759 MobiDBLite consensus disorder prediction 224 238 - -
Stsc121146g00007 759 SMART serkin_6 346 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121146g00007 759 MobiDBLite consensus disorder prediction 85 133 - -
Stsc121146g00007 759 SUPERFAMILY Protein kinase-like (PK-like) 343 738 IPR011009 -
Stsc121146g00007 759 MobiDBLite consensus disorder prediction 273 322 - -
Stsc121146g00007 759 MobiDBLite consensus disorder prediction 715 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121146g00007 Stsc-Chr121146 42231 44936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121146g00007 1 759 AGC Kinase Gene Family AT2G44830 64.096 0.0 917
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc121146g00007 Pkinase 4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121146g00007 - - gmx:100800019 1179.08