Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121145g00003 ATGGCTACTTTTACATCAGTTGCTCTACAAACTTTGGTACCATCTTTGGAAGGAGCCCGTGATCATAGTTCATGGTTGGTGAGAGTGAGATCACACAGATACACAACAGGTCAGAGATTCAACCAGATGAACATTGCAAGGGGATTAACCATTCATTGTGCAGCAACAAAACCAGCAAAATCACCAGCTGAAGAAGATTGGAAGGTTAAGAGAGAAGTTCTGTTGGAAAAAAAGGTAAGAAGTGTTGATGCAAAGGAAGCTCTGCGCCTTCAGAAAGAGAATAAGTTTGTAATTCTTGATGTAAGGCCTGAAGCAGAGTTCAAAGAGGCTCATCCTCCAGATGCCATTAATGTTCAAATATATAGGCTTATAAAAGAGTGGACTGCATGGGACATTGCTAGGCGTGCTGCATTTGCATTTTTTGGCATTTTTTCTGGCACAGAAGAGAACCCTGAGTTCATCCAGACTGTTGAATCAAAATTAGACAAAAATGCAAAGATAATAGTAGCTTGCTCATCAGGGGGTACAATGAAGCCAACACAAAATCTCCCAGAAGGTCAACAATCAAGGTCTCTGATAGCAGCTTACCTGCTGGTCCTTAATGGTTTTACAAATGTCTTCCATCTAGAAGGAGGCCTTTATGCATGGTTTAAAGAGGATCTTCCTACTGTTTCAGATGAGTGA 684 0.4108 MATFTSVALQTLVPSLEGARDHSSWLVRVRSHRYTTGQRFNQMNIARGLTIHCAATKPAKSPAEEDWKVKREVLLEKKVRSVDAKEALRLQKENKFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFIQTVESKLDKNAKIIVACSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGFTNVFHLEGGLYAWFKEDLPTVSDE 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121145g00003 227 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 39 225 IPR043186 -
Stsc121145g00003 227 Pfam Rhodanese-like domain 84 217 IPR001763 -
Stsc121145g00003 227 FunFam Rhodanese-like domain-containing protein 14, chloroplastic 66 224 - -
Stsc121145g00003 227 CDD RHOD 86 216 - -
Stsc121145g00003 227 Gene3D - 77 226 IPR036873 -
Stsc121145g00003 227 SMART rhod_4 82 222 IPR001763 -
Stsc121145g00003 227 ProSiteProfiles Rhodanese domain profile. 92 225 IPR001763 -
Stsc121145g00003 227 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 75 224 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121145g00003 Stsc-Chr121145 9601 11796 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121145g00003 1 227 Sulfurtransferasese or Rhodanese AT4G27700 67.965 3.39e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121145g00003 - - gmx:100788147 363.614