Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121140g00001 GAACTTCAACATTTGAGAAACTGTCTGCCCGATCAAGTAGTCGTTCAGAGAATAGATGAAAGATTATCTGCTCTTGGAAATTGTATAGCTTGTAATGACCATGTGGCTCTCACTCACACCGATCTTGACAGGGAGACAGAGGAAATGATTTCGGATGTTCTTGGAGTAGAAGTTTTTAGGCAGACCATTGCCGGAAATATTCTTGTCGGTAGCTACTGTGCCTTCTCCAACAGAGGGGGATTGGTCCACCCACATACATCAATAGAAGACTTGGATGAGCTCTCTACGCTTCTTCAGGTTCCTTTGGTGGCTGGGACCGTGAACCGTGGCAGTGAAGTGATAGCTGCAGGAATGACAGTGAATGACTGGACAGCGTTTTGCGGCTCAGACACCACGGCGACAGAGCTGTCTGTGATTGAGAGTGTTTTCAAACTGAGGGAGGCACAACCTAGTGCCATTGTGGATGAAATGAGAAAATCTCTCATTGATAGCTATGTCTAA 501 0.4611 ELQHLRNCLPDQVVVQRIDERLSALGNCIACNDHVALTHTDLDRETEEMISDVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSLIDSYV 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121140g00001 166 NCBIfam translation initiation factor IF-6 2 145 IPR002769 GO:0042256|GO:0043022
Stsc121140g00001 166 Gene3D - 1 146 - -
Stsc121140g00001 166 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 165 IPR002769 GO:0042256|GO:0043022
Stsc121140g00001 166 SMART eIF6neu2 1 125 IPR002769 GO:0042256|GO:0043022
Stsc121140g00001 166 Hamap Translation initiation factor 6 [eif6]. 1 166 IPR002769 GO:0042256|GO:0043022
Stsc121140g00001 166 SUPERFAMILY Pentein 1 145 - -
Stsc121140g00001 166 Pfam eIF-6 family 1 124 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121140g00001 Stsc-Chr121140 31 1087 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121140g00001 1 166 Eukaryotic Initiation Factors Gene Family AT3G55620 90.361 1.84e-112 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121140g00001 K03264 - aof:109851362 324.324