Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121130g00001 ATGGACGGGGATAATGGTCTTAACATACGTAATTGGGGTTACTATGAACCTGCTACCTCTTTCAAGAGCCATCTGGGGCTCCAGCTAATGTCGTCGATGCCAGAAAAGCCTCTTCTTGGAGGGCGCAATGCTGCGGTTTTGTCCGGTGCTAATGGTGCATATCACCATAGGGACATTGGGATGCCCCCGGCTACTTACCCTATGGATTACATGAGGGATGCTTGGATTAGTAGTCAGAGAGAGAAGTATATGAATATGATACCTACAAACCCAAGTTATGGTAGTATTCCAGAGACGTCTTCAACGCATCACATGCAAATGATTCCGCCACCTGAGTTATCCGTAAAGGAAGAAAGGCAGGTGGAAGAAGTGCCTGTTGTAGAGAAAGCGAACACCACTGGGAAGAAGAGACAGGGTCCCAAGGTGCCAAAATCTCCCAAGGCAAAGAAGCCCAAAAGGGGGCCTCGCGTTCCTAAGGATGAGAATGCTCCTACAGTTCAACGAGCTAGGGCTCCAAAGAAAACTACTGAAATTGTGATAAATGGGGTCGACTTGGATATTTCGAGTATTCCGATTCCTGTTTGTTCGTGCACTGGGACACCTCAACAGTGTTACCGATGGGGCTCTGGTGGGTGGCAGTCTGCATGTTGTACAACGGGAATGTCTACATATCCTTTGCCTATGAGTACTAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCAGCTGAGGGTTATAACTTTTCTAATCCAATTGATTTGAGGACTTACTGGGCAAAACACGGCACCAATAAGTTTGTCACTATCAGGTAG 852 0.466 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLLGGRNAAVLSGANGAYHHRDIGMPPATYPMDYMRDAWISSQREKYMNMIPTNPSYGSIPETSSTHHMQMIPPPELSVKEERQVEEVPVVEKANTTGKKRQGPKVPKSPKAKKPKRGPRVPKDENAPTVQRARAPKKTTEIVINGVDLDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSTYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121130g00001 283 SMART GAGA_bind_2 1 283 IPR010409 -
Stsc121130g00001 283 PANTHER - 1 283 IPR010409 -
Stsc121130g00001 283 Pfam GAGA binding protein-like family 1 283 IPR010409 -
Stsc121130g00001 283 MobiDBLite consensus disorder prediction 118 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121130g00001 Stsc-Chr121130 4992 7382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121130g00001 1 283 BBR or BPC Transcription factor family AT2G01930 52.843 2.28e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Stsc121130g00001 GAGA_bind 9.1e-111 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121130g00001 - - gmx:100784091 488.804