Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121122g00005 ATGAATATTGAGTGCAGAAACAGTTGCCAAAACAGAGTAAAGAAATTGGAAATGGAGATGAGAGTTATGGAAGATACAGAGATAGCCACAGACATAACTCCATCCCTTCTCCCTCTCACATTTGCTCTCCACAACAACAATCTCCAAACACATTGCTCTTCTTGTTTCTCTCTCCTCCCTTCTTCTCCCATTCACATCACACCCTTGCTCTACTGCTCTCCACCCTGCTCCGCCGCCCATACTTTCCTCCTCCGCCTCCACCACCCCGCACTCTCTCACTCCTCCGACCTCCGCGCCGCCCTCCTCCTCCTCTCCCGCCACCGCCCCTCCGCCACTTCCTCTCGTATCGCCGGCCTCCTCTCCAACCGCCACAAGCTGACGCGCCACCACCTCTCCGACGAGGTTTCCGAGACGATCAGGACCGGAACCAGAGCCTTGGCTACTGCAATTACGGATCTGCGAGGGGAGCTGGCGCCGAACGACGCCGTTTTGGACGAAGCGGAGTGTGCGCTGTGCGCGGTGCTAACGAACGCCGTGGAGGTGCAGGATAAGGAAGGGCGCGCACTCGGAATCGCGGTTTATGGTCCGGCGTTTTCTTGGATCAACCACAGCTGCTCCCCCAATGCCTGCTACCGCTTCATTCTCAATCCTCCTCCTCCTTCTCAGGAATCCAAGCTTAGAATATCTCCATCCTTCATTCGCAGTTCTCCTGATTCACAAATAGATAGTGGGGTTTGTTCTATCACTAATCAATTTCAAAAAGAAGAAGAGGAGCAAGGCTATGGACCAAGGTTGATTGTGAGGAGTATCAAGAGAATCAAAAAGGGACAAGAGGTTACCATAGCTTATACTGATCTCTTGCAGTCTAAGGCAATGCGGCAATCGGATCTATGGTCGAAGTACAGGTTTATCTGCTGTTGCGAGCGATGTAGTGTTGTGCCGTTTACATATGTTGATCATGTACTGCAAGAAATTTCTGTTTCCGGTGGTGATTTTGCCTGTTCAAGCTCCAACTACAATCTTATTAAAGACACAGCTGAAAGAAGACTGACTGATTCAGTTGACGATGCTATATCTGAGTATCTGGTAGCTGGTGATCCTGAGTCTTGCTGTGAGAAGCTTGAGAAGATTCCTATGCAGGGTCTGCTAGACGAGTTGGACAACATTGAAGAAACATCACATTACAAGTTCATGCTGCATCCCCTGCATTACCTCTCCCTAAATGCATACACAACACTGGCTTCAGCATATAAATTTCGTGCTAGTGATATCTTGTCTACAAATTCTGAAATAGATCAGAATCAGTTAGAAGCATTTGACATGAGCAGAACCAGTGCTGCATATTCCTTGTTACTAGCAACTGCAACACATCATCTCTTCAATTCAGAATCCTCACTGATTGCATCTCTTGCAAATTTTTGGACCGGTGCCGGCGAGTCTTTGTTATATCTTGCCAGAAGTTCAGAATGGATCAAGTTTGTCAAATCAAGTCTGGTTGCTTCTTCCGTTGCCAAGGTCAAATGTTCCAAGTGTTCATTAATGGATAAATTTAGAGCCTGTATGTGTAATGGTAAAATTAAGAATGATGATTTCGAGAATGTATCAAATGAGTTCCTTGATTGCATCTCAAATGATGCAACACAGAAGGTTTGGAGCTTCCTTATCATTGGTTGCCATTTTTTGAGATCAATCAATAATCCTATCGATTCGGGATGGTTAGTCTCCACCAGAAGTTCCAGAACAACGGTTGATCCCGGAGCTCTGGCTATGAAAAAATCTGAACCATGTGAAGAACAAACTTGCAATGATAATACTAGGATACAGATATTTCAGCTGGGTGTACACTGCTTAGCATATGGAGGATTATTGGCTGCTATATGTTATGGTCACCATTCTCATTTGGCTTCATATGTTGAACAAATTCTGGATGATGAAGAGTGA 1941 0.459 MNIECRNSCQNRVKKLEMEMRVMEDTEIATDITPSLLPLTFALHNNNLQTHCSSCFSLLPSSPIHITPLLYCSPPCSAAHTFLLRLHHPALSHSSDLRAALLLLSRHRPSATSSRIAGLLSNRHKLTRHHLSDEVSETIRTGTRALATAITDLRGELAPNDAVLDEAECALCAVLTNAVEVQDKEGRALGIAVYGPAFSWINHSCSPNACYRFILNPPPPSQESKLRISPSFIRSSPDSQIDSGVCSITNQFQKEEEEQGYGPRLIVRSIKRIKKGQEVTIAYTDLLQSKAMRQSDLWSKYRFICCCERCSVVPFTYVDHVLQEISVSGGDFACSSSNYNLIKDTAERRLTDSVDDAISEYLVAGDPESCCEKLEKIPMQGLLDELDNIEETSHYKFMLHPLHYLSLNAYTTLASAYKFRASDILSTNSEIDQNQLEAFDMSRTSAAYSLLLATATHHLFNSESSLIASLANFWTGAGESLLYLARSSEWIKFVKSSLVASSVAKVKCSKCSLMDKFRACMCNGKIKNDDFENVSNEFLDCISNDATQKVWSFLIIGCHFLRSINNPIDSGWLVSTRSSRTTVDPGALAMKKSEPCEEQTCNDNTRIQIFQLGVHCLAYGGLLAAICYGHHSHLASYVEQILDDEE 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121122g00005 646 CDD SET_SMYD 156 310 - -
Stsc121122g00005 646 Gene3D - 51 93 - -
Stsc121122g00005 646 PANTHER PROTEIN SET DOMAIN GROUP 41 18 645 - -
Stsc121122g00005 646 Pfam SET domain 179 283 IPR001214 GO:0005515
Stsc121122g00005 646 Gene3D - 94 178 - -
Stsc121122g00005 646 Gene3D SET domain 262 310 IPR046341 -
Stsc121122g00005 646 SUPERFAMILY SET domain 74 305 IPR046341 -
Stsc121122g00005 646 Coils Coil 6 26 - -
Stsc121122g00005 646 Gene3D SET domain 38 213 IPR046341 -
Stsc121122g00005 646 SUPERFAMILY SET domain 191 308 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121122g00005 Stsc-Chr121122 29657 33609 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc121122g00005 SET 3.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121122g00005 - - ahf:112802999 988.793