Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121118g00002 ATGGCTTCTTCTAACAACACCACCTCCTCCATCAAAATCGTTGACAAGTGCAGAGTTTCTCCACCACCAGAACAATCAACCGAGGTTGTTTCTCTTCCTCTTACTCACTTTGACTTGTTCTGGGTTCGCTTCCACCCCGTTGAGCGTGTCTTCTTCTACAAACTTCACTCTCCTCCATCTTTCTTCTTCGAACAAGTTCTTCCCAAGCTCAAAACCTCCCTCTCTCTTACCCTCCAACACTTCCTCCCTCTCGCTGGAAACTTGGTTTGGCCTTCTGATTCCGATAAGCCATTCGTTCAGTACAATCCCGGTGACGGTGTTTCACTTCTCGTAGCAGAATCCGATGCAGATTTCAACCATCTTTTGGGGTTTAACTCACCCCGTGAAGCTTCTGAAACTCGATGCTTCGTACCAGAATTGGAAACACTGGAATACCATGCTGCTGCTATGTCTCTTCAGATCACTCTCTTCCCCAACAGCGGATTCAGCATCGGAATCAGCACCCACCATGCTGTTGTCGATGGGAAATCTTCCACCATGTTCATCAAAGCATGGGCTTCCATATGTCAAAGCCTTGAGGAAGGAGAATCACAAGAAGAATCAACAACTTTAGTTCATGAATTGGAGCCTTTCTTTGATAGACAAGTTATCAAAGATCCAAAGAATCTTGGGCTCATATTCTTGAACAATTGGTCAGAAGCCATGGCTCAAATGTTCCCTAATGATGATGAGATCACCAAAAACAAGAAAAGCTTGAAGATTCTACCGTTTGAACCCAAGGTGAAAGACTCTGTTCGTGCAACGTTCAAGCTAACACGTTCGGATTTGGAGAAGGTGAAGAAAAATGTGTTGTCTAATTGGAACAACAACGTTAATAATGGTTTGAATGATGGTGACGATGAAGAATCAACAAATACACCACCTAGTACTCTTTCTACTTTTGTTCTAACCTGCAGCTATGTCACGGTTTGCATCGCTAAGGCGATTAATGGAGTTTATAAGGAGAGACAAAAATTCGGGTTCGCATTCACCGTGGATTGTAGGAAGAGGTTAAATCCTCCAATACCTGAAAACTATTGTGGTAACTGCGTGTGGGGCCATTTTGTTGATGCAAAAGCAGAGGACTATGTTAAGGAAAATGGAGTGGTCCTTGTTGCTAAGGGAATTTACAAGGAGACAAAGAAGTTGGGCACTGAAGACATTCTTGAAGGAGTAGAAGAATCAGCGTTTGATAAGTACATGGATATGGCTAAAGAAGGAATTGAAATCGTTGGTATTGCTGGCTCTAATAGGTTTGGTGTTTATGGTATTGATTTTGGTTGGGGAAAGCCCGAGAAAGTTGATATAGCTTCGATTGATAGAGGTGTAACAATGGGTTTGGCTGAGAATGGTGATGGGAATGAAGGTGGGGTCGAGGTTGGTCTTGTTCTTAATAATCAGGTCATGGATCTCTTTAGGACTTTGTTTCGTCAAGGACTTGAACATGTTTGA 1491 0.4292 MASSNNTTSSIKIVDKCRVSPPPEQSTEVVSLPLTHFDLFWVRFHPVERVFFYKLHSPPSFFFEQVLPKLKTSLSLTLQHFLPLAGNLVWPSDSDKPFVQYNPGDGVSLLVAESDADFNHLLGFNSPREASETRCFVPELETLEYHAAAMSLQITLFPNSGFSIGISTHHAVVDGKSSTMFIKAWASICQSLEEGESQEESTTLVHELEPFFDRQVIKDPKNLGLIFLNNWSEAMAQMFPNDDEITKNKKSLKILPFEPKVKDSVRATFKLTRSDLEKVKKNVLSNWNNNVNNGLNDGDDEESTNTPPSTLSTFVLTCSYVTVCIAKAINGVYKERQKFGFAFTVDCRKRLNPPIPENYCGNCVWGHFVDAKAEDYVKENGVVLVAKGIYKETKKLGTEDILEGVEESAFDKYMDMAKEGIEIVGIAGSNRFGVYGIDFGWGKPEKVDIASIDRGVTMGLAENGDGNEGGVEVGLVLNNQVMDLFRTLFRQGLEHV 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121118g00002 496 Gene3D - 261 496 IPR023213 -
Stsc121118g00002 496 Gene3D - 10 243 IPR023213 -
Stsc121118g00002 496 PANTHER - 11 494 - -
Stsc121118g00002 496 Pfam Transferase family 13 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121118g00002 Stsc-Chr121118 22688 24178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121118g00002 11 485 Monolignol Biosynthesis Gene Families AT5G48930 25.050 6.24e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121118g00002 - - aip:107635420 741.88