Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121115g00004 ATGGAAGGCACTAATGAATCGTCTGCTTCTGAGTTTTCATCTGTATCAGAATCGAGTATCCAGATTTTGGACGATGACGAACATGATTATATTCCAAGGGCTGGGATGACTTTCCATACACTTGAAGATGCTTCTGCTTTTTATAAAGAGTATGCTAAACGTGTTGGATTCTCTACTAAGATAAGGAACACTAATAGGTGCAAGGAGACCAAGGAAATAAAGAACCAACTTATCACATGTAATAGGGAGGGGAAATGGACTTCTGAGATACCGTGTGTGGAGAAGAGTAATCCTACGTGTGGTGCGAATTGTCCTACTAGGATTTATGTGCACATAGTGAAGAAAACGTTACGCTGGTGTATTTCGAAGGTGGTTCTTAATCACTTACATCCGTGTTGCCCTGATCAATCCCGAATGTTGCCTCAGCATAGGGACCCAATGTATAAAGGTTTCGAACCCTAG 462 0.4156 MEGTNESSASEFSSVSESSIQILDDDEHDYIPRAGMTFHTLEDASAFYKEYAKRVGFSTKIRNTNRCKETKEIKNQLITCNREGKWTSEIPCVEKSNPTCGANCPTRIYVHIVKKTLRWCISKVVLNHLHPCCPDQSRMLPQHRDPMYKGFEP 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121115g00004 153 Pfam FAR1 DNA-binding domain 47 133 IPR004330 -
Stsc121115g00004 153 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121115g00004 Stsc-Chr121115 33147 34017 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc121115g00004 FAR1 1.1e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121115g00004 - - adu:110280446 158.688