Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121112g00002 ATGGCGGACCCAAAGATTTCGGCGTACTACCAAACACGTATGGCCCACTTCGGTGCCGTCACCAACGACTGGCTCGCCCAGGCTCAGTCCGCCTCCGCCATCACCACCACCACGCCACCACCATCATCTCCGCCACCAACCGCCGCAACTCTCTCCGATCCCACCCACCAGAAACCCTCGTTCTCGGTCATCGACGAATTCAACCGGTGGCGGAATCAGCCTGACCTGGCGGAGGCCGTCGCCGCAATCCGCGCCCTCGCCGCAGTCATAAGATCGAGCATGGCCACCACAATGATGCAGCTCGAGATCGAACTCAAATCCGCCTCTGATTCCCTCAAGTCATGGGATACAACCTCTATATCATTGACAGCAGCATGTGATCTGTTTATGCGGTATGTAACTAGGACTGCTGCTTTAGAATACGAAGACTTCAATTCGGCTAAGTCTCGCTTGATTGAACGTGCCGATAAGTTTGGGGAGATCTCATACACGGCTCGCAAAGTCATTGCAATGCTGAGTCAAGATTTTATATTCAATGGTTGTACAATTTTGGTTCATGGTTTTTCTAGAGTTGTCTTGGAGGTTCTAAAATTGGCAGCACAAAATAAAAAATTGTTTCGGGTTTTATGCACAGAGGGGAGACCAGACCGAACAGGGTTACGGTTGTCCAATGAATTGGTCAAGCTGGATGTTCCTGTGAAACTTGTAATAGACTCTGCAGTGGCATATACTATGGATGAGGTGGACATGGTATTTGTGGGGGCAGATGGAGTTGTCGAAAGTGGCGGTATAATCAACATGATGGGCACATACCAAATTGCGATGGTCGCAAAGAGCATGAGCAAGCCAGTTTATGTGGCAGCTGAAAGCTACAAGTTTGCTCGTCTTTACCCGTTGGATCAAAAGGATTTGGCACCTGCATTGCGCCCAGTTGACTTCGGTGTACCAATTCCATCAAAGGTAGAGGTTGAATGTTCTGCAAGGGATTACACTCCTCCTCAATATCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCTGTTGTTAGTGATGAGCTTATCCAGCTATACTTATAG 1083 0.4866 MADPKISAYYQTRMAHFGAVTNDWLAQAQSASAITTTTPPPSSPPPTAATLSDPTHQKPSFSVIDEFNRWRNQPDLAEAVAAIRALAAVIRSSMATTMMQLEIELKSASDSLKSWDTTSISLTAACDLFMRYVTRTAALEYEDFNSAKSRLIERADKFGEISYTARKVIAMLSQDFIFNGCTILVHGFSRVVLEVLKLAAQNKKLFRVLCTEGRPDRTGLRLSNELVKLDVPVKLVIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIAMVAKSMSKPVYVAAESYKFARLYPLDQKDLAPALRPVDFGVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121112g00002 360 MobiDBLite consensus disorder prediction 31 57 - -
Stsc121112g00002 360 FunFam Translation initiation factor eIF-2B subunit alpha 164 360 - -
Stsc121112g00002 360 Gene3D - 60 161 IPR042528 -
Stsc121112g00002 360 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 18 360 - -
Stsc121112g00002 360 Pfam Initiation factor 2 subunit family 73 348 IPR000649 GO:0044237
Stsc121112g00002 360 Gene3D - 163 360 IPR042529 -
Stsc121112g00002 360 FunFam Translation initiation factor eIF-2B subunit alpha 59 161 - -
Stsc121112g00002 360 SUPERFAMILY NagB/RpiA/CoA transferase-like 76 359 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121112g00002 Stsc-Chr121112 2178 4941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121112g00002 6 360 Eukaryotic Initiation Factors Gene Family AT1G53880 78.873 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121112g00002 K03239 - qsa:O6P43_027485 560.836