Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121108g00012 ATGGCTCAGGGAATAGGCAGTGCAACAATGGCTACAATGCTATTAATGCTTATGTTAGTGCTTCACTCTGATATAGCTTATGCAGCTACATACAAAGTTGGAGATGCAGCTGGTTGGAGCTTTCATGTTGATAACTGGCCTAACGGAAAGCACTTTGTAGCTGGCGATACACTCGTATTCAGTTATGCTGTGGGAGCACATAACGTGGTAGTAGTAAACCAAGCCGGTTACGAGGGATGCAATACTCCGCCAGGAAGCCCAGTGCATACGTCAGGAAACGATCAAATCCAGCTCGTCAAAGGAATGAACTATTTCATTTGCAATTTTCCTGGTCACTGTGAAGGAGGAATGAAAATTGCAGTCAATGCTGCATGA 375 0.4453 MAQGIGSATMATMLLMLMLVLHSDIAYAATYKVGDAAGWSFHVDNWPNGKHFVAGDTLVFSYAVGAHNVVVVNQAGYEGCNTPPGSPVHTSGNDQIQLVKGMNYFICNFPGHCEGGMKIAVNAA 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121108g00012 124 CDD Plantacyanin 29 123 IPR041844 -
Stsc121108g00012 124 ProSiteProfiles Phytocyanin domain profile. 29 124 IPR003245 GO:0009055
Stsc121108g00012 124 FunFam basic blue protein-like 29 123 - -
Stsc121108g00012 124 SUPERFAMILY Cupredoxins 29 123 IPR008972 -
Stsc121108g00012 124 ProSitePatterns Type-1 copper (blue) proteins signature. 101 117 IPR028871 -
Stsc121108g00012 124 Gene3D - 29 123 IPR008972 -
Stsc121108g00012 124 PANTHER BLUE COPPER PROTEIN 25 122 IPR039391 GO:0009055
Stsc121108g00012 124 Pfam Plastocyanin-like domain 44 117 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121108g00012 Stsc-Chr121108 53504 54423 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121108g00012 10 123 Phytocyanin Superfamily AT1G17800 40.833 1.34e-23 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121108g00012 - - zju:125424248 166.392