Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121107g00008 ATGTTTGCAGTTGTAGTTCTCTCGCCAAACTACGCTTCCTCCAGCTGGTGCTTGGATGAGTTATGCAACATCATTGACTGCAAGAACAAGCTGGGGCTACTGATGGTGGCAGTGTTCTATGGCGTGGAGCCATGTGATGTGAGGCACCAAATTGGAACCTTCAGAGAAGCTTTCAAGAAGCACCAACAGAGACATGGCAGTGTGAAGGTTCGAAGATGGAGAGATACGTTATCTCAAGTTGCTGACTATTCTGGTTGGAGCTCCAAAAATCAGGATGAAGCAGCACTTGTGGAAAATATTGCTCAACATATATTTGAAATACTGATTCCGAAGTTGCCATCTTCAATGAAGAATCTTGTGGGGATTGAATCAAGAGTGGAACAAGTGATTAGTCAAATAGGCCTTGGATTGAATGATGTTCGCTACATCGGCATCTGGGGAATGGGCGGCATAGGTAAGACAACTATCGCTAGAGCTGTCTTTGAAACCATTCGAAGTAGATTTGACGTTACTTGCTTTCTTGCTGATGTGAGGGAGCATTTTGAGAAAAAAGATATTACTGACGTACAAAAGCAACTTCTGGAACAAATGAATATAAGTTCAAATGCTGTCCATAACAAGTATGAGGGGAGGAGAATAATTCAAAACTCTTTACGTCTCAAAAAGGTACTTCTTGCTCTTGATGATGTAAATCATGAAAAACAACTAGAAAATTTGGCCGAGGAGAAAGATTGGTTTGGTCCTGGAAGCAAAATAATCATTACAACTAGAGATATAGAGGTGCTAAAGCAACAAGAGGTGCATGAAACTTATAAGATTGAAGGGTTAGTGGAAAGCGAAGCCTTTAACCTCTTTTGTTCCAAAGCTTTTAAACAGCCAAAACCTTTAGAAGAGTTTTTGGATTTGTCTGCAAGTGTCATAAATTACAGTGGTGGTCTTCCATTGGCACTTAAAGTATTGGGTTCCTATCTTAAAGGACGTAAGAAAGATGATGTAACAAGGATATTAGAAGGCTGTGGTCAAGATGCTGGAATTGGTATTGATATTTTGATTAATCGAACATTGGTAACATTAGAGGAGAATTTGTACGGAGATACTGTTATGGGGATGCATGATCTGCTCGAAGAAATGGGCAAACATATTGTAATTCAAGAATCTCCAAATGATGCTAGTAAGCGAAGCAGATTGTGGTGTTGGGAAGATGTTGATTTTTTACTCACTCAAAAGAAGGAAATTGTAGCAACTCAAAGCATGGTTCTATATATGCGCTCGCTGGATACTGGAGAGAATTGGAGAGATTTGGATATAAGGGGTTCATCTTTCTCAAATCTGGAGCTTCTTATTTTAGATGGCGTGACAGCTCCCATTCTCTACAATATTCCTTGTACATTAAAGGTTTTGCGCTGGAAAGAATGTCCATTGGATACTCTGCCCTTTACAGATCAACACTATGAACTTGTTGAAATTGATCTGCATGAAAGCAAAATTGTACAATTATGGGACGGAAAGAAGTTTCTAAATAAGTTAGAGCACTTGAATCTGTCCAGCTGTTATAAGCTGAAGGAAACACCAGATCTTTCTGGGGCTCCCAATCTTAAAGCACTTAATCTTAAGGGATGTCATGAGCTGAATTATATTCACCCATCTCTTACCCACCACAGGAACCTTATTGAATTGAATTTATCTAGATGTATTAGGCTTGAAACACATGGAGATAAGTTAGAGATGAGTTCACTCAAGAAACTAGAGTGCTGCAGTTGTTTGAGAAGACTGCCAGAATTTGGAGAATGCATGAAACAGTTATCGATGCTTATATTGGATCATATAGACATACAAGAGCTATCCAGTTCTTTTGGAAACATGGTTGGCCTGACTGAGTTGCACTTATATGTATGGCCATGGCTGTTTACAGGTCGTCCTATATCACATGGACATTTCGATGGCCTAAAGAAGCTGTCGTTACAGTTAAAGTTCCTAGCAGTTGTGGCTTTCGGGCAAATCCAAGATACAGATGGACTTTTGAGTTCTGTCTCTCTTCTAACCTCGTTGAGGAGTCTGACATTATATAGTTGTTTTCCCAAATCTGAAGAGTATTACAAGCAACTAAATTCTTGCTCTAAATTGGAGGTTTTGCCAGATCTTCCATCAAGACTAAGAGTATTACAAGCAAGTAGTTGTTATTCACTAGATGCATCCAATGTGAATGATGTAATATCAAAGGCGTGCTGTGTCTTTGCAGAATCAGCTACCCAAGATGGTGAAGACATCTTTGAAATGGTGATCCCTGGGAAGGACATTCCAGCATGGTTTGACCATCAGGAACAAGGTAATGGAGTATCAGTCTCATTTTCGTATAATTTCTCTTCAACTAAGACCATGGCACTTTCTCTCTGTTTCGTATTTGATGGTCCAAACTACGAAATGGAACGTTCTGTGATCTGCTGCAATGGTGAAGAATTCATCAACAAGAGTTTATTAGAGGTGTTGCCGTGGATGTATTTTGGGAATATGTGCATTGTCTTCCTGAATGGTTACTATTTTAGTAACCTGTTAGGCCAACACAATCGCTTCCATATCCTATTTCCCGGTAATACTGATTTTAATACCCGTGTAACGAGATCTGCAACACGTTGGGTGTGTAACCAAGACATTCAAGTTCCTGATTTCAAGAAAAGAAAAGCAACTCTTGAACTGAGGGAGTAA 2703 0.3959 MFAVVVLSPNYASSSWCLDELCNIIDCKNKLGLLMVAVFYGVEPCDVRHQIGTFREAFKKHQQRHGSVKVRRWRDTLSQVADYSGWSSKNQDEAALVENIAQHIFEILIPKLPSSMKNLVGIESRVEQVISQIGLGLNDVRYIGIWGMGGIGKTTIARAVFETIRSRFDVTCFLADVREHFEKKDITDVQKQLLEQMNISSNAVHNKYEGRRIIQNSLRLKKVLLALDDVNHEKQLENLAEEKDWFGPGSKIIITTRDIEVLKQQEVHETYKIEGLVESEAFNLFCSKAFKQPKPLEEFLDLSASVINYSGGLPLALKVLGSYLKGRKKDDVTRILEGCGQDAGIGIDILINRTLVTLEENLYGDTVMGMHDLLEEMGKHIVIQESPNDASKRSRLWCWEDVDFLLTQKKEIVATQSMVLYMRSLDTGENWRDLDIRGSSFSNLELLILDGVTAPILYNIPCTLKVLRWKECPLDTLPFTDQHYELVEIDLHESKIVQLWDGKKFLNKLEHLNLSSCYKLKETPDLSGAPNLKALNLKGCHELNYIHPSLTHHRNLIELNLSRCIRLETHGDKLEMSSLKKLECCSCLRRLPEFGECMKQLSMLILDHIDIQELSSSFGNMVGLTELHLYVWPWLFTGRPISHGHFDGLKKLSLQLKFLAVVAFGQIQDTDGLLSSVSLLTSLRSLTLYSCFPKSEEYYKQLNSCSKLEVLPDLPSRLRVLQASSCYSLDASNVNDVISKACCVFAESATQDGEDIFEMVIPGKDIPAWFDHQEQGNGVSVSFSYNFSSTKTMALSLCFVFDGPNYEMERSVICCNGEEFINKSLLEVLPWMYFGNMCIVFLNGYYFSNLLGQHNRFHILFPGNTDFNTRVTRSATRWVCNQDIQVPDFKKRKATLELRE 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121107g00008 900 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 728 IPR044974 GO:0006952
Stsc121107g00008 900 Pfam NB-ARC domain 125 328 IPR002182 GO:0043531
Stsc121107g00008 900 SUPERFAMILY L domain-like 370 726 - -
Stsc121107g00008 900 Gene3D - 109 272 IPR027417 -
Stsc121107g00008 900 Pfam TIR domain 1 120 IPR000157 GO:0007165
Stsc121107g00008 900 Gene3D - 276 341 IPR042197 -
Stsc121107g00008 900 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 86 IPR035897 -
Stsc121107g00008 900 Gene3D Ribonuclease Inhibitor 396 741 IPR032675 -
Stsc121107g00008 900 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 340 IPR027417 -
Stsc121107g00008 900 ProSiteProfiles TIR domain profile. 1 108 IPR000157 GO:0007165
Stsc121107g00008 900 Pfam C-JID domain 761 804 IPR045344 -
Stsc121107g00008 900 Gene3D - 1 108 IPR035897 -
Stsc121107g00008 900 PRINTS Disease resistance protein signature 142 157 - -
Stsc121107g00008 900 PRINTS Disease resistance protein signature 217 231 - -
Stsc121107g00008 900 PRINTS Disease resistance protein signature 504 520 - -
Stsc121107g00008 900 PRINTS Disease resistance protein signature 310 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121107g00008 Stsc-Chr121107 42568 46269 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121107g00008 4 721 WRKY Transcription Factor Family AT4G12020 25.945 1.13e-57 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121107g00008 - - ahf:112797493 974.926