Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121107g00004 ATGGTATCAACTCATGGCATCGTTCTAAGAGATTACTCGGATGAGGAGAATACTGATGACTTGGATGAGGAGAATCCATCGGATGAGCCGGATGAGGAGAATACTGATCACTCGGATGAGGAGAATACATTGGATCGGAGAGATTTATCTTTCTCAAATATGTGCCGGCTAAAGTTTCTCCTTTTAGATTGCATTAAAACTGCCTTTCTCTGCAATATTCCTTATACATTAAAGGTTTTCGGGTGGAGATATTGTCCAATGAAAACTCTACCCTCTGCGGATCATCAACGCTATGAACTTGTTGAAATTGATCTGACTAGAAGCAAAATTGTACAATTATGGAATGGAAAGAAGTTTCTTAATAAGTTAGAGCACTTGAATCTGTCCGACTGTCACAAGCTGAAGGAAACACCAGATCTTTCCGGGGCTCCCAATCTTAAAACACTTGATCTTCAACGTTGTTACAAGCTGAAAACCATTCACCCGTCTATTACCCACCACAAGAAACTTGTTGAATTGAAGATAACTAATTGTTGGAGTCTTGAAACACTTGGAGATAAATGGGAGATGAGTTCACTCAAGAAACTAAATATATTAGAAGACTATTTTAGATGGTGTAAAATCTTTAGACTTCCAGAATTTGGGGAATGCATGAAACAGTTATCGATTCTTACTGTGAAACTTGGAAACATAATGGAGCTACCCAGTACTTTTGGAAATTTGGTTGGCCTCACTGAGTTGTACTTAGATTTAGGGCATATTGGTCTTCCCAAACCACTTGGATGTTTCCTTTGCCTAAAGAAGTTGTCGTTACGCCAGGCAGACCCGGACCTAATAATTAGTGATTTTCCGTTGTACCACTGCTGCAGCTGTTATTGCCGTGAATTGGAGGTTTTGCCAGAGCTTCCATCAAGTCTAAGAGTATTAGATGCAAGTGGTTGTTATTCACTAGATGCATCCGATGTGAATGATGTAATATCAAAGGCATGCTGTGGCTTTGCAGAATCAGCTAGCCAAGATGGTGAAGACGTCTTTGAAATGGTGATCCCTGGGAAGGGGAAGGACATTCCAGCATGGTTTGAGCATCAGGAACAAGGTAACGGAGTATCACTCTCATTCTCACATAATTGCCCTTCAACTCAAACCATGGCACTTTCTCTCTGTTTCGTATTTGATGATCCAAACTACAAAATGGAACCTTCAGTGATCTGCTGCATTGGTAAAGAATTCATCAACAAGAGTTTATTAAAGGTGTTGCCCTGGATGTATTCTGGGGATATGGCCATTGTCTTCCTGAATGGTTACTATGTTAGTAACCTGTTAGGCCAACACAATCGTTTCCATATCCTATTTCCCAATCATACTGATTATAATATTAATACCCCTGTAACAAGATCTGCAGCACGTTGGGTGTGTTACCAAGGCATTCAAGATTTCAAGAAAAGAAAAGCAGCTCTTGAACTGAGGGAGTAA 1473 0.4019 MVSTHGIVLRDYSDEENTDDLDEENPSDEPDEENTDHSDEENTLDRRDLSFSNMCRLKFLLLDCIKTAFLCNIPYTLKVFGWRYCPMKTLPSADHQRYELVEIDLTRSKIVQLWNGKKFLNKLEHLNLSDCHKLKETPDLSGAPNLKTLDLQRCYKLKTIHPSITHHKKLVELKITNCWSLETLGDKWEMSSLKKLNILEDYFRWCKIFRLPEFGECMKQLSILTVKLGNIMELPSTFGNLVGLTELYLDLGHIGLPKPLGCFLCLKKLSLRQADPDLIISDFPLYHCCSCYCRELEVLPELPSSLRVLDASGCYSLDASDVNDVISKACCGFAESASQDGEDVFEMVIPGKGKDIPAWFEHQEQGNGVSLSFSHNCPSTQTMALSLCFVFDDPNYKMEPSVICCIGKEFINKSLLKVLPWMYSGDMAIVFLNGYYVSNLLGQHNRFHILFPNHTDYNINTPVTRSAARWVCYQGIQDFKKRKAALELRE 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121107g00004 490 SUPERFAMILY L domain-like 50 316 - -
Stsc121107g00004 490 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 318 IPR044974 GO:0006952
Stsc121107g00004 490 MobiDBLite consensus disorder prediction 1 43 - -
Stsc121107g00004 490 Gene3D Ribonuclease Inhibitor 36 330 IPR032675 -
Stsc121107g00004 490 MobiDBLite consensus disorder prediction 15 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121107g00004 Stsc-Chr121107 19205 21197 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121107g00004 51 250 WRKY Transcription Factor Family AT4G12020 33.028 3.87e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121107g00004 - - adu:107485873 386.726